RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 E7ENX8 843 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 AREL1O15033 823 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 ADAMTS3O15072 1205 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 VPS4BO75351 444 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 GPANK1O95872 356 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 ATXN1LP0C7T5 689 aaKnown RBP6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 IL1R1P14778 569 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 KCNA2P16389 499 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 FGFR4P22455 802 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 TRAPPC10P48553 1259 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 HSPA7P48741 367 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 TAP2Q03519 686 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 RRP1BQ14684 758 aaKnown RBP6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 SLC35G1Q2M3R5 365 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 CATSPERGQ6ZRH7 1159 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 GAS2L3Q86XJ1 694 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 SYTL1Q8IYJ3 562 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 TTC9BQ8N6N2 239 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 PSD4Q8NDX1 1056 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 LOXL4Q96JB6 756 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 WWC2-AS2Q96NR7 200 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 SLC46A1Q96NT5 459 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 PPP1R9BQ96SB3 815 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 BDH2Q9BUT1 245 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 TRPM5Q9NZQ8 1165 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 KCNE5Q9UJ90 142 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 CDC23Q9UJX2 597 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 SORCS3Q9UPU3 1222 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 RAD54BQ9Y620 910 aa6.51□□□□□ -1.37
CKS1BP1-201ENST00000555221 A0A0G2JLL6 359 aaPredicted RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 HNRNPDLO14979 420 aaKnown RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 ERN1O75460 977 aaKnown RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 RPS6KA4O75676 772 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 SCAF4O95104 1147 aaKnown RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 MYL4P12829 197 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 HOXA5P20719 270 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 ACRV1P26436 265 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 EEF1GP26641 437 aaKnown RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 IL1R2P27930 398 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 IL6STP40189 918 aaPredicted RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 HSD11B2P80365 405 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 OCA2Q04671 838 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 STARD3Q14849 445 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 NFIXQ14938 502 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 PRKD1Q15139 912 aaPredicted RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 INSCQ1MX18 579 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 MPEG1Q2M385 716 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 PDCD4Q53EL6 469 aaKnown RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 ERAP2Q6P179 960 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 LAYNQ6UX15 382 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 CLNKQ7Z7G1 428 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 MAPKAPK5Q8IW41 473 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 CHST13Q8NET6 341 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 POC1BQ8TC44 478 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 SMCR8Q8TEV9 937 aaPredicted RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 MESP1Q9BRJ9 268 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 TTYH3Q9C0H2 523 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 XPNPEP3Q9NQH7 507 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 HSFX1Q9UBD0 423 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 MTO1Q9Y2Z2 717 aaKnown RBP6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 FPGT-TNNI3KV9GXZ4 949 aa6.5□□□□□ -1.37
CKS1BP1-201ENST00000555221 AATKQ6ZMQ8 1374 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 GAGE12HA6NDE8 117 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 GRXCR1A8MXD5 290 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 K7ESM1 405 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZNF185O15231 689 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 CCP110O43303 1012 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 ACVR2AP27037 513 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 GCLCP48506 637 aaPredicted RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 ANXA11P50995 505 aaKnown RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 LOXL3P58215 753 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 JAG1P78504 1218 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 GRM1Q13255 1194 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 SLC29A2Q14542 456 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 PDCD2Q16342 344 aaPredicted RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 MGAT5BQ3V5L5 792 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 PLA1AQ53H76 456 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 RABL3Q5HYI8 236 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 ARMC6Q6NXE6 501 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 TAF2Q6P1X5 1199 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 PGBD2Q6P3X8 592 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 SLC30A10Q6XR72 485 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 CCDC150Q8NCX0 1101 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 CPT1CQ8TCG5 803 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 RAPGEF4Q8WZA2 1011 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 ZSWIM1Q9BR11 485 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 SLC46A2Q9BY10 475 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 MAGEB5Q9BZ81 275 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 DHX36Q9H2U1 1008 aaKnown RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 PPCSQ9HAB8 311 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 MRPS18AQ9NVS2 196 aaKnown RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 CTTNBP2NLQ9P2B4 639 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 MID2Q9UJV3 735 aa6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 MAGED2Q9UNF1 606 aaPredicted RBP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.49□□□□□ -1.37
CKS1BP1-201ENST00000555221 A0A087WV62 115 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms