RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
PSEN1-211ENST00000554995 MRPS18AQ9NVS2 196 aaKnown RBP6.38□□□□□ -1.39
PSEN1-211ENST00000554995 GJD2Q9UKL4 321 aa6.38□□□□□ -1.39
PSEN1-211ENST00000554995 CNOT6Q9ULM6 557 aaKnown RBP6.38□□□□□ -1.39
PSEN1-211ENST00000554995 MROH6A6NGR9 719 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 RRN3P2A6NIE6 340 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 RAB27BO00194 218 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 KCNQ3O43525 872 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
PSEN1-211ENST00000554995 ITGA5P08648 1049 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 MED14OSP0DP75 135 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 TCF15Q12870 199 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 SLC29A2Q14542 456 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 CSRP2Q16527 193 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 TIGD6Q17RP2 521 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 DOK3Q7L591 496 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 GPRIN1Q7Z2K8 1008 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 RNF169Q8NCN4 708 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 ZFP28Q8NHY6 868 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 STT3BQ8TCJ2 826 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 TFAP2CQ92754 450 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 ZNF512Q96ME7 567 aaPredicted RBP6.37□□□□□ -1.39
PSEN1-211ENST00000554995 NELL2Q99435 816 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 C12orf65Q9H3J6 166 aaKnown RBP6.37□□□□□ -1.39
PSEN1-211ENST00000554995 MAP3K20Q9NYL2 800 aaKnown RBP6.37□□□□□ -1.39
PSEN1-211ENST00000554995 PDP2Q9P2J9 529 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 HESX1Q9UBX0 185 aa6.37□□□□□ -1.39
PSEN1-211ENST00000554995 SCAF8Q9UPN6 1271 aaKnown RBP6.37□□□□□ -1.39
PSEN1-211ENST00000554995 A0A1B0GVC2 190 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 ASNA1O43681 348 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 B4GALT4O60513 344 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 IDEP14735 1019 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 FDXRP22570 491 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 VIPR2P41587 438 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 WNT3P56703 355 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 RAC3P60763 192 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 FSTL1Q12841 308 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 TBX2Q13207 712 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-211ENST00000554995 ARL6IP4Q66PJ3 421 aaKnown RBP6.36□□□□□ -1.39
PSEN1-211ENST00000554995 TANGO2Q6ICL3 276 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 SULT6B1Q6IMI4 303 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 USP17L6PQ6QN14 398 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 FAM111BQ6SJ93 734 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 CRTC1Q6UUV9 634 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 KIAA0408Q6ZU52 694 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 GPR135Q8IZ08 494 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 PDPRQ8NCN5 879 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 DACT3Q96B18 629 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-211ENST00000554995 PPP1R9BQ96SB3 815 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 DPYSL5Q9BPU6 564 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 FAM167BQ9BTA0 163 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 CNPPD1Q9BV87 410 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 KATNAL1Q9BW62 490 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 CPEB1Q9BZB8 566 aaKnown RBP6.36□□□□□ -1.39
PSEN1-211ENST00000554995 ZHX3Q9H4I2 956 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 FBXO9Q9UK97 447 aaPredicted RBP6.36□□□□□ -1.39
PSEN1-211ENST00000554995 HDAC5Q9UQL6 1122 aa6.36□□□□□ -1.39
PSEN1-211ENST00000554995 LOC102723971A0A1B0GUV8 181 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 H7C4K7 107 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 RFXAPO00287 272 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 INMTO95050 263 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 ITGB1P05556 798 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 XRCC6P12956 609 aaKnown RBP eCLIP6.35□□□□□ -1.39
PSEN1-211ENST00000554995 EGR1P18146 543 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 DDIT3P35638 169 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 CPT1AP50416 773 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 ARHGEF7Q14155 803 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 TAF12Q16514 161 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PLAG1Q6DJT9 500 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 FCRL6Q6DN72 434 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 MZT2AQ6P582 158 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 SPOCD1Q6ZMY3 1216 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 ATG14Q6ZNE5 492 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PCGF5Q86SE9 256 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 FAM83AQ86UY5 434 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 TICAM2Q86XR7 235 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 NAXEQ8NCW5 288 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PPHLN1Q8NEY8 458 aaKnown RBP6.35□□□□□ -1.39
PSEN1-211ENST00000554995 USP13Q92995 863 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-211ENST00000554995 EID2BQ96D98 161 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PPM1MQ96MI6 270 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PRPF18Q99633 342 aaKnown RBP6.35□□□□□ -1.39
PSEN1-211ENST00000554995 TLR10Q9BXR5 811 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PCDHAC1Q9H158 963 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 XPNPEP3Q9NQH7 507 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 ZMYND8Q9ULU4 1186 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-211ENST00000554995 CAPN11Q9UMQ6 739 aa6.35□□□□□ -1.39
PSEN1-211ENST00000554995 PRR5-ARHGAP8B1AHC4 643 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 EYA2O00167 538 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 CCP110O43303 1012 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 EPB41L2O43491 1005 aaKnown RBP6.34□□□□□ -1.39
PSEN1-211ENST00000554995 VPS4BO75351 444 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 PRSS23O95084 383 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 CYP2C9P11712 490 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 CKBP12277 381 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 TPH1P17752 444 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 BDNFP23560 247 aa6.34□□□□□ -1.39
PSEN1-211ENST00000554995 GEMIN4P57678 1058 aaKnown RBP6.34□□□□□ -1.39
PSEN1-211ENST00000554995 DDX10Q13206 875 aaKnown RBP6.34□□□□□ -1.39
PSEN1-211ENST00000554995 MAPKAPK3Q16644 382 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms