RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 RHOBTB2Q9BYZ6 727 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 GTPBP4Q9BZE4 634 aaKnown RBP13.25□□□□□ -0.29
SYNE2-214ENST00000554928 DNAJC25Q9H1X3 360 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 DPEP3Q9H4B8 488 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 WDR6Q9NNW5 1121 aaKnown RBP13.25□□□□□ -0.29
SYNE2-214ENST00000554928 CEP72Q9P209 647 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 FAM50BQ9Y247 325 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 YIPF1Q9Y548 306 aa13.25□□□□□ -0.29
SYNE2-214ENST00000554928 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 CLUHO75153 1309 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 MYBPHLA2RUH7 354 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 IKBKBO14920 756 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 SLC16A3O15427 465 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 PDGFRBP09619 1106 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 WARSP23381 471 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 ELF1P32519 619 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 PIK3CAP42336 1068 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 AP3M2P53677 418 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 TWF1Q12792 350 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 SLC5A9Q2M3M2 681 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 DCAF17Q5H9S7 520 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 INTS6LQ5JSJ4 861 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 RBM43Q6ZSC3 357 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 PLCD3Q8N3E9 789 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 SYAP1Q96A49 352 aaPredicted RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 MYADMQ96S97 322 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 SRRTQ9BXP5 876 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 VRTNQ9H8Y1 702 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 PIDD1Q9HB75 910 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 PRKAG3Q9UGI9 489 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 HMGXB4Q9UGU5 601 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 GTF3C4Q9UKN8 822 aa13.24□□□□□ -0.29
SYNE2-214ENST00000554928 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
SYNE2-214ENST00000554928 ASS1P00966 412 aaKnown RBP13.23□□□□□ -0.29
SYNE2-214ENST00000554928 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ATF6P18850 670 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 HOXA9P31269 272 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ATICP31939 592 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 CCR2P41597 374 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ASPAP45381 313 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 NLRP12P59046 1061 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 TNNC1P63316 161 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ORC1Q13415 861 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 UVSSAQ2YD98 709 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 SDHAF4Q5VUM1 108 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 TCERG1LQ5VWI1 586 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 CCDC149Q6ZUS6 474 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 GET4Q7L5D6 327 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-214ENST00000554928 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 RNF135Q8IUD6 432 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 TMEM86AQ8N2M4 240 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 CEP63Q96MT8 703 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 NECTIN4Q96NY8 510 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 SYT15Q9BQS2 421 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 SMOC2Q9H3U7 446 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 TMEM8AQ9HCN3 771 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ABI2Q9NYB9 513 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-214ENST00000554928 TMEM63CQ9P1W3 806 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
SYNE2-214ENST00000554928 MTCL1Q9Y4B5 1905 aaKnown RBP13.23□□□□□ -0.29
SYNE2-214ENST00000554928 DENND4AQ7Z401 1863 aa13.23□□□□□ -0.29
SYNE2-214ENST00000554928 BICDL2A1A5D9 508 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 GOLGA6L22H0YM25 854 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 TNFRSF10AO00220 468 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 TACC1O75410 805 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 MOSPD3O75425 235 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 CLSTN1O94985 981 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 LRG1P02750 347 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ASGR2P07307 311 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 RHOP08100 348 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 PPP1R2P41236 205 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 LHX1P48742 406 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 MXI1P50539 228 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 MYL7Q01449 175 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ENPEPQ07075 957 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 SGSM1Q2NKQ1 1148 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 CCDC40Q4G0X9 1142 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 DPH6Q7L8W6 267 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 IRF2BP1Q8IU81 584 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 OR6B3Q8NGW1 331 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ING5Q8WYH8 240 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 TATDN2Q93075 761 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 SEPT5Q99719 369 aaPredicted RBP13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ACBD6Q9BR61 282 aa13.22□□□□□ -0.29
SYNE2-214ENST00000554928 OXCT2Q9BYC2 517 aaPredicted RBP13.22□□□□□ -0.29
SYNE2-214ENST00000554928 ZNF334Q9HCZ1 680 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms