RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 PYM1Q9BRP8 204 aaKnown RBP13.49□□□□□ -0.25
RDH11-207ENST00000554731 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
RDH11-207ENST00000554731 SEMA4GQ9NTN9 838 aa13.49□□□□□ -0.25
RDH11-207ENST00000554731 ZMYM5Q9UJ78 669 aa13.49□□□□□ -0.25
RDH11-207ENST00000554731 SDK1Q7Z5N4 2213 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 ANKRD63C9JTQ0 380 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 SLC30A4O14863 429 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 NMT1P30419 496 aaKnown RBP13.48□□□□□ -0.25
RDH11-207ENST00000554731 HOXA6P31267 233 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 LONP1P36776 959 aaKnown RBP13.48□□□□□ -0.25
RDH11-207ENST00000554731 MCM2P49736 904 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 CDR1P51861 262 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 TNK2Q07912 1038 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 SRSF5Q13243 272 aaKnown RBP13.48□□□□□ -0.25
RDH11-207ENST00000554731 PTPAQ15257 358 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 CSRP2Q16527 193 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 WSCD1Q658N2 575 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 PRR23CQ6ZRP0 262 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 SPPL2BQ8TCT7 592 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 CCSER1Q9C0I3 900 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
RDH11-207ENST00000554731 AGO2Q9UKV8 859 aaKnown RBP13.48□□□□□ -0.25
RDH11-207ENST00000554731 NUP210Q8TEM1 1887 aaPredicted RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 TISP43B9A030 160 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 FOXD2O60548 495 aaPredicted RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 POU5F1Q01860 360 aaKnown RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 LRRTM3Q86VH5 581 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 CMTM8Q8IZV2 173 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 SLC46A2Q9BY10 475 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 ST6GALNAC4Q9H4F1 302 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 C2orf42Q9NWW7 574 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 ABI2Q9NYB9 513 aaPredicted RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 SMC3Q9UQE7 1217 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 STYXL1Q9Y6J8 313 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 CNOT1A5YKK6 2376 aaKnown RBP13.47□□□□□ -0.25
RDH11-207ENST00000554731 SCN1AP35498 2009 aa13.47□□□□□ -0.25
RDH11-207ENST00000554731 KPNA7A9QM74 516 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 IL18RAPO95256 599 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 DDX6P26196 483 aaKnown RBP eCLIP13.46□□□□□ -0.25
RDH11-207ENST00000554731 AVPR1AP37288 418 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 TSPY1Q01534 308 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 GRIN1Q05586 938 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 GRSF1Q12849 480 aaKnown RBP eCLIP13.46□□□□□ -0.25
RDH11-207ENST00000554731 POSTNQ15063 836 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 SV2CQ496J9 727 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
RDH11-207ENST00000554731 BRAPQ7Z569 592 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 NT5DC4Q86YG4 428 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
RDH11-207ENST00000554731 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 HVCN1Q96D96 273 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 PCDHB5Q9Y5E4 795 aa13.46□□□□□ -0.25
RDH11-207ENST00000554731 TSC2P49815 1807 aa13.46□□□□□ -0.26
RDH11-207ENST00000554731 EXTL3O43909 919 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 ADRB1P08588 477 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 DDIT3P35638 169 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 PNPLA4P41247 253 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 NLRP12P59046 1061 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 BFSP1Q12934 665 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 RUNX3Q13761 415 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 SF3A1Q15459 793 aaKnown RBP13.45□□□□□ -0.26
RDH11-207ENST00000554731 PPM1JQ5JR12 505 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 SFR1Q86XK3 245 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 EFCAB13Q8IY85 973 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 MAB21L3Q8N8X9 362 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 FAM83CQ9BQN1 747 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 KIF9Q9HAQ2 790 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.45□□□□□ -0.26
RDH11-207ENST00000554731 RALGAPA1Q6GYQ0 2036 aa13.45□□□□□ -0.26
RDH11-207ENST00000554731 ANK1P16157 1881 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 SOBPA7XYQ1 873 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 TULP1O00294 542 aaPredicted RBP13.44□□□□□ -0.26
RDH11-207ENST00000554731 GDF9O60383 454 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 ATG13O75143 517 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
RDH11-207ENST00000554731 F11P03951 625 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 CSH1P0DML2 217 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 CSH2P0DML3 217 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
RDH11-207ENST00000554731 ADSSP30520 456 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 HOXC13P31276 330 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 AMPD2Q01433 879 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 NFE2Q16621 373 aaPredicted RBP13.44□□□□□ -0.26
RDH11-207ENST00000554731 TMEM196Q5HYL7 178 aa13.44□□□□□ -0.26
RDH11-207ENST00000554731 CC2D1AQ6P1N0 951 aaPredicted RBP13.44□□□□□ -0.26
RDH11-207ENST00000554731 CRELD2Q6UXH1 353 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms