RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FAM3CQ92520 227 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 PSMG2Q969U7 264 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 BORCS6Q96GS4 357 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 FAM84AQ96KN4 292 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 LPIN3Q9BQK8 851 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 STRA6Q9BX79 667 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 ZCWPW1Q9H0M4 648 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 CLSTN2Q9H4D0 955 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 SLITRK6Q9H5Y7 841 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 IL21Q9HBE4 155 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 FBXO2Q9UK22 296 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-215ENST00000554656 HPSEQ9Y251 543 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 DERAQ9Y315 318 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 EML5Q05BV3 1969 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 GREB1Q4ZG55 1949 aa11.43□□□□□ -0.58
SHMT2-215ENST00000554656 MYO16Q9Y6X6 1858 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 ATG2BQ96BY7 2078 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 KIAA1549LQ6ZVL6 1849 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 RALGAPA1Q6GYQ0 2036 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 SLC38A8A6NNN8 435 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 MAN2B1O00754 1011 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 ZNF263O14978 683 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 NCAM2O15394 837 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 KRT18P05783 430 aaKnown RBP11.42□□□□□ -0.58
SHMT2-215ENST00000554656 TGM1P22735 817 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 CCNE1P24864 410 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 HOXC13P31276 330 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 ALDH1A3P47895 512 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 CYP4F8P98187 520 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 SATB1Q01826 763 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 FCHO2Q0JRZ9 810 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 PLD1Q13393 1074 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 SLC39A12Q504Y0 691 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 DYMQ7RTS9 669 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 LRRTM3Q86VH5 581 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 CD302Q8IX05 232 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-215ENST00000554656 FMR1NBQ8N0W7 255 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-215ENST00000554656 ATRIPQ8WXE1 791 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 DNAJC19Q96DA6 116 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 ZFYVE19Q96K21 471 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 PYM1Q9BRP8 204 aaKnown RBP11.42□□□□□ -0.58
SHMT2-215ENST00000554656 FGFBP2Q9BYJ0 223 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 LMAN1LQ9HAT1 526 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 RBM12Q9NTZ6 932 aaKnown RBP11.42□□□□□ -0.58
SHMT2-215ENST00000554656 C2orf42Q9NWW7 574 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 DLL3Q9NYJ7 618 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 AGO2Q9UKV8 859 aaKnown RBP11.42□□□□□ -0.58
SHMT2-215ENST00000554656 C2CD2Q9Y426 696 aa11.42□□□□□ -0.58
SHMT2-215ENST00000554656 PTPRDP23468 1912 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
SHMT2-215ENST00000554656 A0A087X0B3 334 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 GOLGA6L3A6NEY3 463 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 MYMKA6NI61 221 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 CYB561D2O14569 222 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 CHADO15335 359 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 GABRR2P28476 465 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 CTHP32929 405 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 CASP5P51878 434 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 DMWDQ09019 674 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 L1TD1Q5T7N2 865 aaKnown RBP11.41□□□□□ -0.58
SHMT2-215ENST00000554656 GPR158Q5T848 1215 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 WSCD1Q658N2 575 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 MAMSTRQ6ZN01 415 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 Q6ZS52 159 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 ZNF720Q7Z2F6 126 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 TMEM150AQ86TG1 271 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 STKLD1Q8NE28 680 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 RASSF8Q8NHQ8 419 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 CLIC6Q96NY7 704 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 GPR88Q9GZN0 384 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 ASB7Q9H672 318 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 PARD6AQ9NPB6 346 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 TMLHEQ9NVH6 421 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 DPP3Q9NY33 737 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 FAM13BQ9NYF5 915 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 NCDNQ9UBB6 729 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 HSFX1Q9UBD0 423 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 ASB3Q9Y575 518 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 SPAG17Q6Q759 2223 aa11.41□□□□□ -0.58
SHMT2-215ENST00000554656 SYCE3A1L190 88 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 PFKFB1P16118 471 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 TAF6P49848 677 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 TNK2Q07912 1038 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 CCDC142Q17RM4 750 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 RSPO4Q2I0M5 234 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-215ENST00000554656 ARMCX5Q6P1M9 558 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 DGLUCYQ7Z3D6 616 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 TTC8Q8TAM2 541 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 RIN3Q8TB24 985 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 GIPC2Q8TF65 315 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 E2F7Q96AV8 911 aa11.4□□□□□ -0.58
SHMT2-215ENST00000554656 SEPT5Q99719 369 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms