RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 BARX1Q9HBU1 254 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 HOMER2Q9NSB8 354 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 FBXO40Q9UH90 709 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 SFMBT1Q9UHJ3 866 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ISY1Q9ULR0 285 aaKnown RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 ZMYND8Q9ULU4 1186 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 CTDP1Q9Y5B0 961 aaPredicted RBP4.84□□□□□ -1.63
VTI1B-203ENST00000554636 NR2E3Q9Y5X4 410 aa4.84□□□□□ -1.63
VTI1B-203ENST00000554636 MYH6P13533 1939 aa4.84□□□□□ -1.64
VTI1B-203ENST00000554636 TNKSO95271 1327 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SYNRGQ9UMZ2 1314 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 BAZ2BQ9UIF8 2168 aaKnown RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 MYADML2A6NDP7 307 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 LAMTOR5O43504 91 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 IL18BPO95998 194 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ICAM1P05362 532 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ADRB1P08588 477 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 CYP21A2P08686 494 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ALAS1P13196 640 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 AKR1A1P14550 325 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 MC4RP32245 332 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 NFKB2Q00653 900 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 CNTN2Q02246 1040 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 DBPQ10586 325 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 NFATC3Q12968 1075 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 IKQ13123 557 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 LRRC41Q15345 812 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SEC23AQ15436 765 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 IMMTQ16891 758 aaKnown RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SLC35G1Q2M3R5 365 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 CCDC178Q5BJE1 867 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 GJC2Q5T442 439 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 FSTL4Q6MZW2 842 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 GLB1LQ6UWU2 654 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SLC30A10Q6XR72 485 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ARMCX2Q7L311 632 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 BRAPQ7Z569 592 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 DGKHQ86XP1 1220 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 NLGN4XQ8N0W4 816 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ANKRD35Q8N283 1001 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 KLHDC9Q8NEP7 349 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 MORC4Q8TE76 937 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 RUFY2Q8WXA3 655 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SREK1Q8WXA9 508 aaKnown RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 GDF15Q99988 308 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 KRT23Q9C075 422 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SENP6Q9GZR1 1112 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 OSBPL2Q9H1P3 480 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 CPVLQ9H3G5 476 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 KCND1Q9NSA2 647 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SMPD4Q9NXE4 827 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 HSPBP1Q9NZL4 362 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 CTNNA3Q9UI47 895 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ST6GALNAC2Q9UJ37 374 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 ZHX1Q9UKY1 873 aaPredicted RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 CCPG1Q9ULG6 757 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 DDX49Q9Y6V7 483 aaKnown RBP4.83□□□□□ -1.64
VTI1B-203ENST00000554636 SZT2Q5T011 3432 aa4.83□□□□□ -1.64
VTI1B-203ENST00000554636 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 KBTBD13C9JR72 458 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 H0Y858 1186 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ZNF561-AS1K7EIQ3 104 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 SCDO00767 359 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 GSTA4O15217 222 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CTAGE5O15320 804 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 KLHL18O94889 574 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 PGK1P00558 417 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 KNG1P01042 644 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 GOLGA8HP0CJ92 632 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 RARBP10826 455 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 NAT1P18440 290 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 PTGS1P23219 599 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CST5P28325 142 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ADCY8P40145 1251 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 MAGEA10P43363 369 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ANTXR2P58335 489 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ACVR2BQ13705 512 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CDC37Q16543 378 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 LONRF2Q1L5Z9 754 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ASPRV1Q53RT3 343 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 C2orf27AQ580R0 203 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 BMP2KLQ5H9B9 411 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 FIGNQ5HY92 759 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 GPATCH4Q5T3I0 446 aaKnown RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 IFIT1BQ5T764 474 aaKnown RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CCSAPQ6IQ19 270 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ARHGEF18Q6ZSZ5 1173 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 C16orf59Q7L2K0 433 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CENPQQ7L2Z9 268 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 FGD2Q7Z6J4 655 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 RALYLQ86SE5 291 aaKnown RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 IQCA1Q86XH1 822 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 MB21D2Q8IYB1 491 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 KLHL36Q8N4N3 616 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 ZSWIM2Q8NEG5 633 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 THAP3Q8WTV1 239 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms