RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CYB5D1Q6P9G0 228 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GJB7Q6PEY0 223 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 BORAQ6PGQ7 559 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KCTD1Q719H9 257 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MARK2Q7KZI7 788 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CACNA2D4Q7Z3S7 1137 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 MYLK4Q86YV6 388 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 RASGRP3Q8IV61 690 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TEX9Q8N6V9 391 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 FBXL13Q8NEE6 735 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ACMSDQ8TDX5 336 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 USP33Q8TEY7 942 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GTF3C2Q8WUA4 911 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KCTD13Q8WZ19 329 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GATA6Q92908 595 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 ALKBH8Q96BT7 664 aaKnown RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 CABS1Q96KC9 395 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SLC2A13Q96QE2 648 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 AP1M1Q9BXS5 423 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 STMN4Q9H169 189 aaPredicted RBP3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SDCBP2Q9H190 292 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 BHMT2Q9H2M3 363 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 GDAP2Q9NXN4 497 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 SMARCAL1Q9NZC9 954 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 IL37Q9NZH6 218 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 KIAA1257Q9ULG3 409 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TNFSF13BQ9Y275 285 aa3.66□□□□□ -1.82
SEC23A-207ENST00000554615 TRAF5O00463 557 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 DAPK3O43293 454 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ADCY3O60266 1144 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ZWINTO95229 277 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 AOC1P19801 751 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 HTR7P34969 479 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 RWDD2BP57060 319 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 PLCB2Q00722 1185 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SP2Q02086 613 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 KCNC4Q03721 635 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 MBTD1Q05BQ5 628 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SEMA5AQ13591 1074 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 CUL2Q13617 745 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 BLMHQ13867 455 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 RFTN1Q14699 578 aaPredicted RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 INTS6LQ5JSJ4 861 aaKnown RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 MANEALQ5VSG8 457 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ANGEL2Q5VTE6 544 aaKnown RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF772Q68DY9 489 aaPredicted RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SLFN12LQ6IEE8 588 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 HAUS6Q7Z4H7 955 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SESTD1Q86VW0 696 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 XYLT1Q86Y38 959 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ANKRD13AQ8IZ07 590 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 KIAA0319LQ8IZA0 1049 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 NME8Q8N427 588 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 FBXO25Q8TCJ0 367 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ASAP3Q8TDY4 903 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SLC44A1Q8WWI5 657 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 C18orf8Q96DM3 657 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SLC52A3Q9NQ40 469 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 CYP26B1Q9NR63 512 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 KLC4Q9NSK0 619 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 HACD3Q9P035 362 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 ANKIB1Q9P2G1 1089 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 HECAQ9UBI9 543 aaPredicted RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 SIX4Q9UIU6 781 aa3.65□□□□□ -1.82
SEC23A-207ENST00000554615 CORO1CQ9ULV4 474 aaPredicted RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 NAP1L2Q9ULW6 460 aaPredicted RBP3.65□□□□□ -1.82
SEC23A-207ENST00000554615 NPIPB8E9PQR5 432 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 IL18RAPO95256 599 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 FTCDO95954 541 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 MMEP08473 750 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 MYZAPP0CAP1 466 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 NQO1P15559 274 aaKnown RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 TGM2P21980 687 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 CCND1P24385 295 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 HARS2P49590 506 aaKnown RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF135P52742 658 aaPredicted RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 INHBEP58166 350 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 TAS2R40P59535 323 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 BTG3Q14201 252 aaPredicted RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 PIGHQ14442 188 aaPredicted RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 NBPF20Q3BBV1 942 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ZC2HC1CQ53FD0 456 aaPredicted RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 TMCO4Q5TGY1 634 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 SLC30A10Q6XR72 485 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 SV2AQ7L0J3 742 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 SLC47A2Q86VL8 602 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 TRIM50Q86XT4 487 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ECHDC2Q86YB7 292 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF683Q8IZ20 524 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 RPUSD2Q8IZ73 545 aaKnown RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 CYP4X1Q8N118 509 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 GOLM1Q8NBJ4 401 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF564Q8TBZ8 553 aaPredicted RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ACER1Q8TDN7 264 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 GPR101Q96P66 508 aaPredicted RBP3.65□□□□□ -1.83
SEC23A-207ENST00000554615 CBWD1Q9BRT8 395 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 ZNF408Q9H9D4 720 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 TRPC7Q9HCX4 862 aa3.65□□□□□ -1.83
SEC23A-207ENST00000554615 BMP2KQ9NSY1 1161 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms