RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 CYB561D2O14569 222 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 GDF9O60383 454 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 KRT18P05783 430 aaKnown RBP26.17■■□□□ 1.78
FOXA1-204ENST00000554607 ATF6P18850 670 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 AMPD2Q01433 879 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 GRSF1Q12849 480 aaKnown RBP eCLIP26.17■■□□□ 1.78
FOXA1-204ENST00000554607 IL31Q6EBC2 164 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 SLFN12LQ6IEE8 588 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 CMTM8Q8IZV2 173 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 KIF2CQ99661 725 aa26.17■■□□□ 1.78
FOXA1-204ENST00000554607 KMT2BQ9UMN6 2715 aaPredicted RBP26.17■■□□□ 1.78
FOXA1-204ENST00000554607 HAPLN1P10915 354 aaPredicted RBP26.16■■□□□ 1.78
FOXA1-204ENST00000554607 DDX6P26196 483 aaKnown RBP eCLIP26.16■■□□□ 1.78
FOXA1-204ENST00000554607 AVPR1AP37288 418 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 TAF6P49848 677 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 GTF2BQ00403 316 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 POU5F1Q01860 360 aaKnown RBP26.16■■□□□ 1.78
FOXA1-204ENST00000554607 DHX8Q14562 1220 aaKnown RBP26.16■■□□□ 1.78
FOXA1-204ENST00000554607 CACNA2D4Q7Z3S7 1137 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 DCP1BQ8IZD4 617 aaKnown RBP26.16■■□□□ 1.78
FOXA1-204ENST00000554607 GIPC2Q8TF65 315 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 GAB3Q8WWW8 586 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 FAM83CQ9BQN1 747 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 PYM1Q9BRP8 204 aaKnown RBP26.16■■□□□ 1.78
FOXA1-204ENST00000554607 ZHX3Q9H4I2 956 aa26.16■■□□□ 1.78
FOXA1-204ENST00000554607 SOBPA7XYQ1 873 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 H3BQV1 296 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 AXIN1O15169 862 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 EXTL3O43909 919 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 TBCAO75347 108 aaKnown RBP26.15■■□□□ 1.78
FOXA1-204ENST00000554607 ACOT2P49753 483 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 LIMK1P53667 647 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 RUNX3Q13761 415 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 ST3GAL2Q16842 350 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 AASDHQ4L235 1098 aaPredicted RBP26.15■■□□□ 1.78
FOXA1-204ENST00000554607 ERICH6BQ5W0A0 696 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 ADALQ6DHV7 355 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 SLC39A4Q6P5W5 647 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 C12orf50Q8NA57 414 aaPredicted RBP26.15■■□□□ 1.78
FOXA1-204ENST00000554607 CCSER1Q9C0I3 900 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 SMG9Q9H0W8 520 aaKnown RBP26.15■■□□□ 1.78
FOXA1-204ENST00000554607 DPP3Q9NY33 737 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 SLC8A2Q9UPR5 921 aa26.15■■□□□ 1.78
FOXA1-204ENST00000554607 RPP40O75818 363 aaKnown RBP26.14■■□□□ 1.78
FOXA1-204ENST00000554607 BFSP1Q12934 665 aa26.14■■□□□ 1.78
FOXA1-204ENST00000554607 TMEM196Q5HYL7 178 aa26.14■■□□□ 1.78
FOXA1-204ENST00000554607 CHAMP1Q96JM3 812 aa26.14■■□□□ 1.78
FOXA1-204ENST00000554607 KIF9Q9HAQ2 790 aa26.14■■□□□ 1.78
FOXA1-204ENST00000554607 AGO2Q9UKV8 859 aaKnown RBP26.14■■□□□ 1.78
FOXA1-204ENST00000554607 TRDMT1O14717 391 aaKnown RBP26.13■■□□□ 1.77
FOXA1-204ENST00000554607 ZNF806P0C7X5 589 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 WSCD1Q658N2 575 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 LRRTM3Q86VH5 581 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 RASSF8Q8NHQ8 419 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 EXOC4Q96A65 974 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 ARRDC1-AS1Q9H2J1 176 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 BLOC1S4Q9NUP1 217 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 TDP1Q9NUW8 608 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 ABI2Q9NYB9 513 aaPredicted RBP26.13■■□□□ 1.77
FOXA1-204ENST00000554607 PCDHB5Q9Y5E4 795 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 TSC2P49815 1807 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 ANK1P16157 1881 aa26.13■■□□□ 1.77
FOXA1-204ENST00000554607 SCN1AP35498 2009 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 ANKRD63C9JTQ0 380 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 AKAP3O75969 853 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 EPN2O95208 641 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 CCDC192P0DO97 292 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 NMT1P30419 496 aaKnown RBP26.12■■□□□ 1.77
FOXA1-204ENST00000554607 NLRP12P59046 1061 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 MCM6Q14566 821 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 SV2CQ496J9 727 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 FSTL4Q6MZW2 842 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 CC2D1AQ6P1N0 951 aaPredicted RBP26.12■■□□□ 1.77
FOXA1-204ENST00000554607 CAMKK1Q8N5S9 505 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 MAB21L3Q8N8X9 362 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 RAD54LQ92698 747 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 FIZ1Q96SL8 496 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 ST6GALNAC4Q9H4F1 302 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 HPS4Q9NQG7 708 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 STYXL1Q9Y6J8 313 aa26.12■■□□□ 1.77
FOXA1-204ENST00000554607 KIF26AQ9ULI4 1882 aaPredicted RBP26.12■■□□□ 1.77
FOXA1-204ENST00000554607 KPNA7A9QM74 516 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 F11P03951 625 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 RAP1GAPP47736 663 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 CDR1P51861 262 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 TSPY1Q01534 308 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 NT5DC4Q86YG4 428 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 MRPS31Q92665 395 aaKnown RBP26.11■■□□□ 1.77
FOXA1-204ENST00000554607 USP13Q92995 863 aaPredicted RBP26.11■■□□□ 1.77
FOXA1-204ENST00000554607 ZNF560Q96MR9 790 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 EBF3Q9H4W6 596 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 PCDHGA5Q9Y5G8 931 aa26.11■■□□□ 1.77
FOXA1-204ENST00000554607 GREB1Q4ZG55 1949 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 SDK1Q7Z5N4 2213 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 BMP15O95972 392 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 CSH1P0DML2 217 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 CSH2P0DML3 217 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 HMGA1P17096 107 aaKnown RBP26.1■■□□□ 1.77
FOXA1-204ENST00000554607 PLCG1P19174 1290 aa26.1■■□□□ 1.77
FOXA1-204ENST00000554607 DRD1P21728 446 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms