RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GJA1P17302 382 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 NR2F2P24468 414 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 PCSK1P29120 753 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 LHX1P48742 406 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 TUFMP49411 452 aaKnown RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 TNNC1P63316 161 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 VEPH1Q14D04 833 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 PARM1Q6UWI2 310 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 ITIH5Q86UX2 942 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 LRRTM3Q86VH5 581 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 OSTM1Q86WC4 334 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 GUF1Q8N442 669 aaKnown RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 SLC44A3Q8N4M1 653 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 FBXL6Q8N531 539 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 TOP6BLQ8N6T0 577 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 CXorf38Q8TB03 319 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 SPPL2BQ8TCT7 592 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-213ENST00000554600 FGF14Q92915 247 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 SMARCE1Q969G3 411 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 NXPE3Q969Y0 559 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 KXD1Q9BQD3 176 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 DUSP12Q9UNI6 340 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 PCDHB5Q9Y5E4 795 aa11.44□□□□□ -0.58
SHMT2-213ENST00000554600 CACNA1HO95180 2353 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 CACNA1AO00555 2505 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 HELZP42694 1942 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 MYO16Q9Y6X6 1858 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 LRRIQ3A6PVS8 624 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 STK25O00506 426 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 CST3P01034 146 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 KRT13P13646 458 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 RPL13P26373 211 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 CCR2P41597 374 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 AP3M2P53677 418 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 MYL6P60660 151 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 SMARCB1Q12824 385 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 SNW1Q13573 536 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 NFE2Q16621 373 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 SOWAHAQ2M3V2 549 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 WDR72Q3MJ13 1102 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 INTS6LQ5JSJ4 861 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 BMP8AQ7Z5Y6 402 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 SPATA2LQ8IUW3 424 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 LEMD2Q8NC56 503 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 FLCNQ8NFG4 579 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 ENGASEQ8NFI3 743 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 PLEKHO2Q8TD55 490 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 PARD3BQ8TEW8 1205 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 GIPC2Q8TF65 315 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 C2orf15Q8WU43 125 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 ZNF516Q92618 1163 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 ASIC4Q96FT7 647 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 LPIN3Q9BQK8 851 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 ACBD6Q9BR61 282 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 PI4K2AQ9BTU6 479 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 RPP25Q9BUL9 199 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 SNX25Q9H3E2 840 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 AVENQ9NQS1 362 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 DMAC2Q9NW81 257 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 GDE1Q9NZC3 331 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 CHMP5Q9NZZ3 219 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 NXF1Q9UBU9 619 aaKnown RBP11.43□□□□□ -0.58
SHMT2-213ENST00000554600 CA14Q9ULX7 337 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 ATG2BQ96BY7 2078 aa11.43□□□□□ -0.58
SHMT2-213ENST00000554600 A0A1W2PRU2 124 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ANHXE9PGG2 379 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 HCRTO43612 131 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 GADD45BO75293 160 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-213ENST00000554600 PDGFRBP09619 1106 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 HAPLN1P10915 354 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SRFP11831 508 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 PSMC1P62191 440 aaKnown RBP11.42□□□□□ -0.58
SHMT2-213ENST00000554600 DLG4P78352 724 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ADAM9Q13443 819 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 TEAD2Q15562 447 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ZNF699Q32M78 642 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ZNF667Q5HYK9 610 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 PRSS36Q5K4E3 855 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ISM2Q6H9L7 571 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SCARA5Q6ZMJ2 495 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 DPH6Q7L8W6 267 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 DNAJB7Q7Z6W7 309 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SCN4BQ8IWT1 228 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 FAM186BQ8IYM0 893 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SIX5Q8N196 739 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 OR6B3Q8NGW1 331 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SPATA18Q8TC71 538 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 GPR152Q8TDT2 470 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SYAP1Q96A49 352 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-213ENST00000554600 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 GCNAQ96QF7 691 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 TSG101Q99816 390 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 SYT15Q9BQS2 421 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 DNAJC25Q9H1X3 360 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 ATXN3LQ9H3M9 355 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 MMRN2Q9H8L6 949 aa11.42□□□□□ -0.58
SHMT2-213ENST00000554600 TMLHEQ9NVH6 421 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms