RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CEP68Q76N32 757 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 GPBP1Q86WP2 473 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 METTL23Q86XA0 190 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 TMC8Q8IU68 726 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 SPEM1Q8N4L4 309 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 TTC9BQ8N6N2 239 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 ATAD1Q8NBU5 361 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 RSPRY1Q96DX4 576 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CALML4Q96GE6 196 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 ZFYVE19Q96K21 471 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CNTNAP3BQ96NU0 1288 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 LPIN3Q9BQK8 851 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 REEP2Q9BRK0 252 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CNTNAP3Q9BZ76 1288 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 HAPLN2Q9GZV7 340 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 DNAJC25Q9H1X3 360 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 CRISPLD1Q9H336 500 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 PARD6AQ9NPB6 346 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 GTSE1Q9NYZ3 720 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 ODF2LQ9ULJ1 636 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 TBX20Q9UMR3 447 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 ASB3Q9Y575 518 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.56□□□□□ -0.88
TDP1-208ENST00000553989 CEP250Q9BV73 2442 aa9.56□□□□□ -0.88
TDP1-208ENST00000553989 MYH11P35749 1972 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 PDCD11Q14690 1871 aaKnown RBP9.55□□□□□ -0.88
TDP1-208ENST00000553989 SPECC1L-ADORA2AF8WAN1 911 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 ARNTLO00327 626 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 PPEF2O14830 753 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 VNN2O95498 520 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 F13A1P00488 732 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 RETP07949 1114 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 NFICP08651 508 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 TDGF1P13385 188 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 FECHP22830 423 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 CDC25CP30307 473 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 CTHP32929 405 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 UBA7P41226 1012 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 AARSP49588 968 aaKnown RBP eCLIP9.55□□□□□ -0.88
TDP1-208ENST00000553989 CYP4F8P98187 520 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 FCHO2Q0JRZ9 810 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 SRSF5Q13243 272 aaKnown RBP9.55□□□□□ -0.88
TDP1-208ENST00000553989 TMEM132DQ14C87 1099 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 PON2Q15165 354 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 ENOX2Q16206 610 aaKnown RBP9.55□□□□□ -0.88
TDP1-208ENST00000553989 TMEM119Q4V9L6 283 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 DGKKQ5KSL6 1271 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 SPATA1Q5VX52 437 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 Q6ZS52 159 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 DNAJB7Q7Z6W7 309 aaPredicted RBP9.55□□□□□ -0.88
TDP1-208ENST00000553989 LONP2Q86WA8 852 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 RALGPS2Q86X27 583 aaPredicted RBP9.55□□□□□ -0.88
TDP1-208ENST00000553989 CD302Q8IX05 232 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 ZNF687Q8N1G0 1237 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 NETO1Q8TDF5 533 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 BPIFB1Q8TDL5 484 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 PSMG2Q969U7 264 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 SENP8Q96LD8 212 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 TMEM209Q96SK2 561 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 PARVGQ9HBI0 331 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 SEMA4GQ9NTN9 838 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 THG1LQ9NWX6 298 aaKnown RBP9.55□□□□□ -0.88
TDP1-208ENST00000553989 DSEQ9UL01 958 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 COL4A2P08572 1712 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 F5P12259 2224 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 DMXL1Q9Y485 3027 aa9.55□□□□□ -0.88
TDP1-208ENST00000553989 MYBPHLA2RUH7 354 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 SCP2P22307 547 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 CNR2P34972 360 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 TUFMP49411 452 aaKnown RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 MLLT6P55198 1093 aaPredicted RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 LILRA4P59901 499 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 DMWDQ09019 674 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 GAS6Q14393 721 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 PTPAQ15257 358 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 ZBTB6Q15916 424 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 C9orf57Q5W0N0 161 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 ARL6IP4Q66PJ3 421 aaKnown RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 ADALQ6DHV7 355 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 TXNDC11Q6PKC3 985 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 MAMSTRQ6ZN01 415 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 PRR23CQ6ZRP0 262 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 GAREM2Q75VX8 874 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 THEM5Q8N1Q8 247 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 OR10T2Q8NGX3 314 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 GIPC2Q8TF65 315 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 PTCD2Q8WV60 388 aaKnown RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 AK8Q96MA6 479 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 PYM1Q9BRP8 204 aaKnown RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 LRRC3Q9BY71 257 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 ZMYND15Q9H091 742 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 TASP1Q9H6P5 420 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 ABI2Q9NYB9 513 aaPredicted RBP9.54□□□□□ -0.88
TDP1-208ENST00000553989 ZKSCAN5Q9Y2L8 839 aa9.54□□□□□ -0.88
TDP1-208ENST00000553989 NCOR2Q9Y618 2525 aa9.53□□□□□ -0.88
TDP1-208ENST00000553989 A0A0B4J269 797 aa9.53□□□□□ -0.88
TDP1-208ENST00000553989 CYB561D2O14569 222 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms