RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SLC30A10Q6XR72 485 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 CHSY1Q86X52 802 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 ANKRD13AQ8IZ07 590 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 KLHDC4Q8TBB5 520 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 MARK4Q96L34 752 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 SMOQ99835 787 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 ACTRT3Q9BYD9 372 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 PDGFCQ9NRA1 345 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 PCDHA13Q9Y5I0 950 aa3.16□□□□□ -1.9
SRP54-204ENST00000553923 MRPL42Q9Y6G3 142 aaKnown RBP3.16□□□□□ -1.9
SRP54-204ENST00000553923 TTBK1Q5TCY1 1321 aaPredicted RBP3.16□□□□□ -1.9
SRP54-204ENST00000553923 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 PRSS29PA6NIE9 313 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 CYSRT1A8MQ03 144 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 POLRMTO00411 1230 aaKnown RBP3.15□□□□□ -1.91
SRP54-204ENST00000553923 SOCS2O14508 198 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 SGTAO43765 313 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 BRINP1O60477 761 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 PRKD3O94806 890 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 EYA4O95677 639 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 NDUFB7P17568 137 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 ARHGAP25P42331 645 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 ERVK-21P61565 698 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 HTRA4P83105 476 aaPredicted RBP3.15□□□□□ -1.91
SRP54-204ENST00000553923 TLE1Q04724 770 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 TCF15Q12870 199 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 RBM20Q5T481 1227 aaKnown RBP3.15□□□□□ -1.91
SRP54-204ENST00000553923 PXDC1Q5TGL8 231 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 TAF2Q6P1X5 1199 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 SLC29A4Q7RTT9 530 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 DTX2Q86UW9 622 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 JAZF1Q86VZ6 243 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 PDSS2Q86YH6 399 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 UBR7Q8N806 425 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 NRACQ8N912 160 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 FANCBQ8NB91 859 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 ATRIPQ8WXE1 791 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 FAM136AQ96C01 138 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 COQ8BQ96D53 544 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 AHCYL2Q96HN2 611 aaKnown RBP3.15□□□□□ -1.91
SRP54-204ENST00000553923 C5orf34Q96MH7 638 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 TINAGL1Q9GZM7 467 aaPredicted RBP3.15□□□□□ -1.91
SRP54-204ENST00000553923 TDP1Q9NUW8 608 aa3.15□□□□□ -1.91
SRP54-204ENST00000553923 ARID4BQ4LE39 1312 aaPredicted RBP3.15□□□□□ -1.91
SRP54-204ENST00000553923 NXPH3O95157 252 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 PDHA1P08559 390 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 CYP4F2P78329 520 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 STAT4Q14765 748 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 TWIST1Q15672 202 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 ZNF618Q5T7W0 954 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 VPS53Q5VIR6 699 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 LHFPL2Q6ZUX7 228 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 WDR53Q7Z5U6 358 aaPredicted RBP3.14□□□□□ -1.91
SRP54-204ENST00000553923 RSPH3Q86UC2 560 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 AFAP1L2Q8N4X5 818 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 SMRP1Q8NCR6 262 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 PSD4Q8NDX1 1056 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 SCAMP4Q969E2 229 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 RITA1Q96K30 269 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 CALCOCO1Q9P1Z2 691 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 IPPQ9Y573 584 aa3.14□□□□□ -1.91
SRP54-204ENST00000553923 LY6G6EA0A0G2JKS1 128 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 MYMKA6NI61 221 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 K7ESF4 209 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 PPM1DO15297 605 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 SOAT2O75908 522 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 EDNRBP24530 442 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 CYP2C18P33260 490 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 LIPAP38571 399 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 THBS3P49746 956 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 EEFSECP57772 596 aaKnown RBP3.13□□□□□ -1.91
SRP54-204ENST00000553923 HOXA4Q00056 320 aaPredicted RBP3.13□□□□□ -1.91
SRP54-204ENST00000553923 HABP2Q14520 560 aaPredicted RBP3.13□□□□□ -1.91
SRP54-204ENST00000553923 RAB39AQ14964 217 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 LRRC41Q15345 812 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 GIMAP6Q6P9H5 292 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 MAVSQ7Z434 540 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 ZNF804AQ7Z570 1209 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 RBMXL3Q8N7X1 1067 aaKnown RBP3.13□□□□□ -1.91
SRP54-204ENST00000553923 PPM1NQ8N819 430 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 PIGOQ8TEQ8 1089 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 NSMCE1Q8WV22 266 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 ASB2Q96Q27 587 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 PPP1R10Q96QC0 940 aaKnown RBP3.13□□□□□ -1.91
SRP54-204ENST00000553923 MACROD1Q9BQ69 325 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 GPR35Q9HC97 309 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 DUSP22Q9NRW4 184 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 WWOXQ9NZC7 414 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 TUBD1Q9UJT1 453 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 AGAP1Q9UPQ3 857 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 WDR17Q8IZU2 1322 aa3.13□□□□□ -1.91
SRP54-204ENST00000553923 TRIM75PA6NK02 468 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 NT5C1B-RDH14C9J2C7 533 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 F2RL2O00254 374 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 FCHO1O14526 889 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 ENPP3O14638 875 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 FGBP02675 491 aa3.12□□□□□ -1.91
SRP54-204ENST00000553923 ATP5F1P24539 256 aaPredicted RBP3.12□□□□□ -1.91
SRP54-204ENST00000553923 ALDH9A1P49189 494 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms