RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 VCPIP1Q96JH7 1222 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 C12orf65Q9H3J6 166 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 DHX33Q9H6R0 707 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 VPS37BQ9H9H4 285 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 EBF2Q9HAK2 575 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 IP6K2Q9UHH9 426 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 CHKBQ9Y259 395 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ACTL7BQ9Y614 415 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 NUMBLQ9Y6R0 609 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 LRRD1A4D1F6 860 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 C3orf70A6NLC5 250 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 SPATA31C2B4DYI2 1134 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 K7ERI5 159 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ECM2O94769 699 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 IFNB1P01574 187 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 CDKN2BP42772 138 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 NAMPTP43490 491 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 VCPP55072 806 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 BACE1P56817 501 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 MYL6P60660 151 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 MKRN3Q13064 507 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 MOGSQ13724 837 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 DNAJC24Q6P3W2 148 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 PPP1R21Q6ZMI0 780 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZBTB33Q86T24 672 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ERP27Q96DN0 273 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 RBM41Q96IZ5 413 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 CFAP57Q96MR6 1250 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 PCYT2Q99447 389 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 MAK16Q9BXY0 300 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 PITPNM3Q9BZ71 974 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF302Q9NR11 478 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 CYTH4Q9UIA0 394 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 PHTF1Q9UMS5 762 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 TCRBV7S3A2A0A539 114 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 PRPF4O43172 522 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ASS1P00966 412 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 CD48P09326 243 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 TBXAS1P24557 533 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 TARSP26639 723 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 IL1R2P27930 398 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 MSH2P43246 934 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 HIRAP54198 1017 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 IL9RQ01113 521 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 CNTN2Q02246 1040 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 RNASELQ05823 741 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 PDIA2Q13087 525 aaKnown RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ORC1Q13415 861 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ACVR2BQ13705 512 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 KCNT1Q5JUK3 1230 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 GPAT2Q6NUI2 795 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 IFNLR1Q8IU57 520 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 RCOR2Q8IZ40 523 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ANKRD35Q8N283 1001 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ARFGAP1Q8N6T3 406 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 JOSD2Q8TAC2 188 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 NSMCE1Q8WV22 266 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF570Q96NI8 536 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 KLHL14Q9P2G3 628 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 C15orf41Q9Y2V0 281 aa7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 FARP1Q9Y4F1 1045 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 MAFBQ9Y5Q3 323 aaPredicted RBP7.31□□□□□ -1.24
LINC-ROR-201ENST00000553704 H0YCG3 227 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SGK1O00141 431 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TYROBPO43914 113 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 DKC1O60832 514 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TMEM63AO94886 807 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TJP3O95049 919 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 UNC5CO95185 931 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ANP32DO95626 131 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 WEE2P0C1S8 567 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 PTPRAP18433 802 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 KRT15P19012 456 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 HMGB2P26583 209 aaKnown RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CDC25CP30307 473 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SSTR1P30872 391 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 RAP1GAPP47736 663 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SLC25A11Q02978 314 aaKnown RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TFDP1Q14186 410 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 MORF4L2Q15014 288 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 PTPN20Q4JDL3 420 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TFDP3Q5H9I0 405 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 FNBP1LQ5T0N5 605 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CIAPIN1Q6FI81 312 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 DENND1BQ6P3S1 775 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 DRICH1Q6PGQ1 229 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 TDRPQ86YL5 185 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 BRSK2Q8IWQ3 736 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 KIAA0319LQ8IZA0 1049 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 RIBC1Q8N443 379 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 GBP7Q8N8V2 638 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 SLC35B2Q8TB61 432 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 C10orf82Q8WW14 230 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF668Q96K58 619 aaPredicted RBP7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CCDC77Q9BR77 488 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZWILCHQ9H900 591 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 ETNK1Q9HBU6 452 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 CISHQ9NSE2 258 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 HACL1Q9UJ83 578 aa7.3□□□□□ -1.24
LINC-ROR-201ENST00000553704 MAGEB2O15479 319 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms