RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PDCD11Q14690 1871 aaKnown RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 DCHS1Q96JQ0 3298 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 FAM170BA6NMN3 283 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 MAPTP10636 758 aaKnown RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 ZNF131P52739 623 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 UBXN2BQ14CS0 331 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 NFIL3Q16649 462 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 KNOP1Q1ED39 458 aaKnown RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 ZNF528Q3MIS6 628 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 XKR4Q5GH76 650 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 ALKAL1Q6UXT8 129 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 EPM2AIP1Q7L775 607 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 MYRIPQ8NFW9 859 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 OR8K1Q8NGG5 319 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 ZNF461Q8TAF7 563 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 GOLGA5Q8TBA6 731 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 RUBCNQ92622 972 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 KCTD10Q9H3F6 313 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 GOLGA2P5Q9HBQ8 144 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 AVENQ9NQS1 362 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 SPATA6Q9NWH7 488 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 ZNHIT6Q9NWK9 470 aaKnown RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 GDE1Q9NZC3 331 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 FBXO4Q9UKT5 387 aa17.23■□□□□ 0.35
ACTN1-209ENST00000553659 MRPS23Q9Y3D9 190 aaKnown RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 MTF2Q9Y483 593 aaPredicted RBP17.23■□□□□ 0.35
ACTN1-209ENST00000553659 I3L4J1 428 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 SLC16A3O15427 465 aaKnown RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 ECI2O75521 394 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 RHOP08100 348 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 CCDC175P0C221 793 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 PTPN2P17706 415 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 GRM5P41594 1212 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 MAGEA9P43362 315 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 BRCC3P46736 316 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 CCDC40Q4G0X9 1142 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 SLC8B1Q6J4K2 584 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 ING5Q8WYH8 240 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 NELL2Q99435 816 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 ACO2Q99798 780 aaKnown RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 HINFPQ9BQA5 517 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 RUSC1Q9BVN2 902 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 TMEM134Q9H6X4 195 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 MRPL44Q9H9J2 332 aaKnown RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 METTL14Q9HCE5 456 aaKnown RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 LTB4R2Q9NPC1 389 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 TOPORSQ9NS56 1045 aaPredicted RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 SLC38A7Q9NVC3 462 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
ACTN1-209ENST00000553659 PPP2R2CQ9Y2T4 447 aa17.22■□□□□ 0.35
ACTN1-209ENST00000553659 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 CCDC169A6NNP5 214 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 LAMTOR5O43504 91 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 ABLIM3O94929 683 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
ACTN1-209ENST00000553659 ELF1P32519 619 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 KRT9P35527 623 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 ZBED6P86452 979 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 SOX4Q06945 474 aaPredicted RBP17.21■□□□□ 0.35
ACTN1-209ENST00000553659 SLC5A9Q2M3M2 681 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 MIIPQ5JXC2 388 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 ZBTB41Q5SVQ8 909 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 CEP120Q8N960 986 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 DNAJC7Q99615 494 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 CDT1Q9H211 546 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 PCDHB13Q9Y5F0 798 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 OTOGLQ3ZCN5 2332 aa17.21■□□□□ 0.35
ACTN1-209ENST00000553659 PHLPP2Q6ZVD8 1323 aa17.21■□□□□ 0.34
ACTN1-209ENST00000553659 TBC1D4O60343 1298 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 LRG1P02750 347 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 CD72P21854 359 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 NPTX2P47972 431 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 PEX3P56589 373 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 ROR1Q01973 937 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 SYCP1Q15431 976 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 VARS2Q5ST30 1063 aaKnown RBP17.2■□□□□ 0.34
ACTN1-209ENST00000553659 DCLK2Q8N568 766 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 CPLX3Q8WVH0 158 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 CLDN23Q96B33 292 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 PCMTD1Q96MG8 357 aaPredicted RBP17.2■□□□□ 0.34
ACTN1-209ENST00000553659 MRPL4Q9BYD3 311 aaKnown RBP17.2■□□□□ 0.34
ACTN1-209ENST00000553659 PLA2G2FQ9BZM2 168 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 NUCKS1Q9H1E3 243 aaKnown RBP17.2■□□□□ 0.34
ACTN1-209ENST00000553659 CGNQ9P2M7 1197 aaKnown RBP17.2■□□□□ 0.34
ACTN1-209ENST00000553659 ZNF292O60281 2723 aa17.2■□□□□ 0.34
ACTN1-209ENST00000553659 UQCRHLA0A096LP55 91 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 WDR27A2RRH5 827 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 USP27XA6NNY8 438 aa17.19■□□□□ 0.34
ACTN1-209ENST00000553659 PODXLO00592 558 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms