RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 ZMYM5Q9UJ78 669 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 MTF2Q9Y483 593 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 NUP210Q8TEM1 1887 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 COL4A3Q01955 1670 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 CACNA1IQ9P0X4 2223 aa16.3■□□□□ 0.2
SDR39U1-205ENST00000553546 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 COL4A2P08572 1712 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 HEPACAM2A8MVW5 462 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 TULP1O00294 542 aaPredicted RBP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 HUS1O60921 280 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 PRPF6O94906 941 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 LMNAP02545 664 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 TMEM191BP0C7N4 346 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 GABRR2P28476 465 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 CDC25CP30307 473 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 VIPR2P41587 438 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 MLLT6P55198 1093 aaPredicted RBP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 ASIC1P78348 528 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 TAF12Q16514 161 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 NFE2Q16621 373 aaPredicted RBP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 DGLUCYQ7Z3D6 616 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 TMEM86AQ8N2M4 240 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 KCNG4Q8TDN1 519 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 DHX58Q96C10 678 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 IER2Q9BTL4 223 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 FGFBP2Q9BYJ0 223 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 OBP2AQ9NY56 170 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 PCDHB5Q9Y5E4 795 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 CEP250Q9BV73 2442 aa16.29■□□□□ 0.2
SDR39U1-205ENST00000553546 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 DPYSL4O14531 572 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 CHADO15335 359 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 SOAT2O75908 522 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 HAPLN1P10915 354 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 ATF6P18850 670 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 WEE1P30291 646 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 WNT7BP56706 349 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 RBP5P82980 135 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 FCHO2Q0JRZ9 810 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 BFSP1Q12934 665 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 ATL3Q6DD88 541 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 GAREM2Q75VX8 874 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 ARID3BQ8IVW6 561 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 CSGALNACT2Q8N6G5 542 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 ZSWIM2Q8NEG5 633 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 CSGALNACT1Q8TDX6 532 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 PCIF1Q9H4Z3 704 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 GDAP2Q9NXN4 497 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 ABI2Q9NYB9 513 aaPredicted RBP16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 PIAS3Q9Y6X2 628 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 R4GN57 208 aa16.28■□□□□ 0.2
SDR39U1-205ENST00000553546 F5P12259 2224 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 UBE4BO95155 1302 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 F13A1P00488 732 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 KRT19P08727 400 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 ZSCAN22P10073 491 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 MYL7Q01449 175 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 MYO1EQ12965 1108 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 FAM26FQ5R3K3 315 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 GPR158Q5T848 1215 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 SHC4Q6S5L8 630 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 LRRTM3Q86VH5 581 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 MAML2Q8IZL2 1156 aaPredicted RBP16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 PDCL2Q8N4E4 241 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 TOP6BLQ8N6T0 577 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 FAM3CQ92520 227 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 LPIN3Q9BQK8 851 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 ACBD6Q9BR61 282 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 MTMR12Q9C0I1 747 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 TASP1Q9H6P5 420 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 ABCB6Q9NP58 842 aa16.27■□□□□ 0.2
SDR39U1-205ENST00000553546 ARNTLO00327 626 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 TNNC2P02585 160 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 PCSK1P29120 753 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 SNRPFP62306 86 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 PPP2R5DQ14738 602 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 ARHGAP29Q52LW3 1261 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 STXBP5Q5T5C0 1151 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 KIAA2013Q8IYS2 634 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 CNTNAP3BQ96NU0 1288 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 C7orf25Q9BPX7 421 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 MKNK1Q9BUB5 465 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 CNTNAP3Q9BZ76 1288 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 C8orf33Q9H7E9 229 aaPredicted RBP16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 INTS13Q9NVM9 706 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 DDX43Q9NXZ2 648 aaKnown RBP16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 FAM13BQ9NYF5 915 aa16.26■□□□□ 0.19
SDR39U1-205ENST00000553546 CFAP45Q9UL16 551 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms