RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CLDN3O15551 220 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 FAM13AO94988 1023 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
SRP54-203ENST00000553544 WEE1P30291 646 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 GTF2BQ00403 316 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 GRSF1Q12849 480 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRP54-203ENST00000553544 COL9A2Q14055 689 aaPredicted RBP12.8□□□□□ -0.36
SRP54-203ENST00000553544 NOLC1Q14978 699 aaKnown RBP eCLIP12.8□□□□□ -0.36
SRP54-203ENST00000553544 SLC10A6Q3KNW5 377 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 GPR158Q5T848 1215 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 CENPPQ6IPU0 288 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 PSAPL1Q6NUJ1 521 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 TMC8Q8IU68 726 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 CAMKK1Q8N5S9 505 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 MYCT1Q8N699 235 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 KRI1Q8N9T8 703 aaKnown RBP12.8□□□□□ -0.36
SRP54-203ENST00000553544 RASSF8Q8NHQ8 419 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 PGLYRP2Q96PD5 576 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 ST6GALNAC4Q9H4F1 302 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 CCDC39Q9UFE4 941 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 TBX20Q9UMR3 447 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
SRP54-203ENST00000553544 ZZEF1O43149 2961 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 A0A087X0B3 334 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 FAM189A1O60320 539 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 VNN2O95498 520 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 KRT18P05783 430 aaKnown RBP12.79□□□□□ -0.36
SRP54-203ENST00000553544 MPLP40238 635 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 AMPD2Q01433 879 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 TNK2Q07912 1038 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 SEZ6Q53EL9 994 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 STXBP5Q5T5C0 1151 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 ARMCX5Q6P1M9 558 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 GAREM2Q75VX8 874 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 ITIH5Q86UX2 942 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
SRP54-203ENST00000553544 PSMG2Q969U7 264 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 DNAJC19Q96DA6 116 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 DNAJC25Q9H1X3 360 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 TASP1Q9H6P5 420 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 GKN1Q9NS71 199 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 ZMIZ1Q9ULJ6 1067 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 TIMM13Q9Y5L4 95 aaPredicted RBP12.79□□□□□ -0.36
SRP54-203ENST00000553544 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.79□□□□□ -0.36
SRP54-203ENST00000553544 TCHHQ07283 1943 aa12.79□□□□□ -0.36
SRP54-203ENST00000553544 ANKRD11Q6UB99 2663 aaPredicted RBP12.78□□□□□ -0.36
SRP54-203ENST00000553544 LAMA1P25391 3075 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 TTC26A0AVF1 554 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 MYMKA6NI61 221 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 K7ENM7 598 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 PPP6R2O75170 966 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 RHOBTB1O94844 696 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 ADRB2P07550 413 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
SRP54-203ENST00000553544 CLTAP09496 248 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 OR4Q2P0C623 313 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
SRP54-203ENST00000553544 GABRR2P28476 465 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 NMT1P30419 496 aaKnown RBP12.78□□□□□ -0.36
SRP54-203ENST00000553544 ABCD1P33897 745 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 NOVA1P51513 510 aaKnown RBP12.78□□□□□ -0.36
SRP54-203ENST00000553544 MYBPC2Q14324 1141 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 TMEM196Q5HYL7 178 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 RRAGBQ5VZM2 374 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 SLC39A4Q6P5W5 647 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 DSTYKQ6XUX3 929 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 CCDC73Q6ZRK6 1079 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 ZNF720Q7Z2F6 126 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 STRA6Q9BX79 667 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 SMOC1Q9H4F8 434 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 PLEKHA5Q9HAU0 1116 aa12.78□□□□□ -0.36
SRP54-203ENST00000553544 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
SRP54-203ENST00000553544 A0A0B4J269 797 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 C1QTNF9BB2RNN3 333 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 SPTLC2O15270 562 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 TBCAO75347 108 aaKnown RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 PPP1R37O75864 691 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 YEATS4O95619 227 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 CXCL8P10145 99 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 LRPAP1P30533 357 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 TXLNAP40222 546 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 TNFSF9P41273 254 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 LIG4P49917 911 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 RUNX3Q13761 415 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 STK38Q15208 465 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms