RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SMARCD2Q92925 531 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 SEPT5Q99719 369 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-207ENST00000553290 ACBD6Q9BR61 282 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 PLA2G2FQ9BZM2 168 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 L1RE1Q9UN81 338 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 PCDHB5Q9Y5E4 795 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 SNX9Q9Y5X1 595 aa13.93□□□□□ -0.18
ACTN1-207ENST00000553290 CACNA1HO95180 2353 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 A0A1W2PRU2 124 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 H0Y858 1186 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 KLRC4O43908 158 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 SOAT2O75908 522 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 HAPLN1P10915 354 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-207ENST00000553290 GJA1P17302 382 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 TNNI1P19237 187 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 SYKP43405 635 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 LHX1P48742 406 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 MRE11P49959 708 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 CYP2J2P51589 502 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 SNW1Q13573 536 aaKnown RBP13.92□□□□□ -0.18
ACTN1-207ENST00000553290 PSMD6Q15008 389 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 TEAD2Q15562 447 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-207ENST00000553290 TAF12Q16514 161 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 ALYREFQ86V81 257 aaKnown RBP13.92□□□□□ -0.18
ACTN1-207ENST00000553290 DTWD2Q8NBA8 298 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 SHKBP1Q8TBC3 707 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 FAM200AQ8TCP9 573 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 FAM84AQ96KN4 292 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 ZSWIM3Q96MP5 696 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 SLITRK6Q9H5Y7 841 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 TRPV4Q9HBA0 871 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 DDX43Q9NXZ2 648 aaKnown RBP13.92□□□□□ -0.18
ACTN1-207ENST00000553290 ABI2Q9NYB9 513 aaPredicted RBP13.92□□□□□ -0.18
ACTN1-207ENST00000553290 SIT1Q9Y3P8 196 aa13.92□□□□□ -0.18
ACTN1-207ENST00000553290 PTPRJQ12913 1337 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 NRG2O14511 850 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 GABRDO14764 452 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 EXOC3O60645 756 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 PSMC3P17980 439 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ATF6P18850 670 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 GABRR2P28476 465 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 PCSK1P29120 753 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 STK4Q13043 487 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 KMT5BQ4FZB7 885 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 INTS6LQ5JSJ4 861 aaKnown RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 SCARA3Q6AZY7 606 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ADGRF2Q8IZF7 708 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ZSCAN18Q8TBC5 510 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 DEPDC1BQ8WUY9 529 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 DNASE1L2Q92874 299 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 CCDC47Q96A33 483 aaKnown RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 HPDLQ96IR7 371 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 CHAMP1Q96JM3 812 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 DDX23Q9BUQ8 820 aaKnown RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 TRMT61BQ9BVS5 477 aaKnown RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ATXN3LQ9H3M9 355 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ZNF334Q9HCZ1 680 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-207ENST00000553290 ABCB6Q9NP58 842 aa13.91□□□□□ -0.18
ACTN1-207ENST00000553290 KANSL1LA0AUZ9 987 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 CDC25CP30307 473 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 NDUFA8P51970 172 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 SOWAHAQ2M3V2 549 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 VITQ6UXI7 678 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 GAREM2Q75VX8 874 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 LIMS2Q7Z4I7 341 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 FSIP1Q8NA03 581 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 PJA1Q8NG27 643 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 TMEM174Q8WUU8 243 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 IRF7Q92985 503 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 CCDC127Q96BQ5 260 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 LPIN3Q9BQK8 851 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 OSBPL6Q9BZF3 934 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 TRPV5Q9NQA5 729 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 TMLHEQ9NVH6 421 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 ZMYM5Q9UJ78 669 aa13.9□□□□□ -0.18
ACTN1-207ENST00000553290 PDXKO00764 312 aa13.89□□□□□ -0.19
ACTN1-207ENST00000553290 KIF20AO95235 890 aa13.89□□□□□ -0.19
ACTN1-207ENST00000553290 RPN1P04843 607 aaKnown RBP13.89□□□□□ -0.19
ACTN1-207ENST00000553290 DCNP07585 359 aaKnown RBP13.89□□□□□ -0.19
ACTN1-207ENST00000553290 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
ACTN1-207ENST00000553290 ACAT1P24752 427 aaKnown RBP13.89□□□□□ -0.19
ACTN1-207ENST00000553290 VIPR2P41587 438 aa13.89□□□□□ -0.19
ACTN1-207ENST00000553290 CDR1P51861 262 aa13.89□□□□□ -0.19
ACTN1-207ENST00000553290 AP3M2P53677 418 aa13.89□□□□□ -0.19
ACTN1-207ENST00000553290 RPL10AP62906 217 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms