RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-208ENST00000552984 SYCP3Q8IZU3 236 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 FAM3CQ92520 227 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 IRF7Q92985 503 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 MTMR12Q9C0I1 747 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 TRPV4Q9HBA0 871 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 PDE11AQ9HCR9 933 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 OLFML3Q9NRN5 406 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 RBAKQ9NYW8 714 aaPredicted RBP12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 L1RE1Q9UN81 338 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 EXOC7Q9UPT5 735 aa12.4□□□□□ -0.42
TUBA1B-208ENST00000552984 MYOFQ9NZM1 2061 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 CACNA1AO00555 2505 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 CCNE1P24864 410 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 CASP1P29466 404 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 HOXC13P31276 330 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 BFSP1Q12934 665 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 POSTNQ15063 836 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 E2F4Q16254 413 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 SV2CQ496J9 727 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 ZC3H14Q6PJT7 736 aaKnown RBP12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 TXNDC11Q6PKC3 985 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 METTL23Q86XA0 190 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 PDCL2Q8N4E4 241 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 SUMF1Q8NBK3 374 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 LINC00301Q8NCQ3 95 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 CXorf38Q8TB03 319 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 DHX58Q96C10 678 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 HINFPQ9BQA5 517 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 PI4K2AQ9BTU6 479 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 PRMT8Q9NR22 394 aaPredicted RBP12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 SIX4Q9UIU6 781 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 FBXO4Q9UKT5 387 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 DSEQ9UL01 958 aa12.39□□□□□ -0.43
TUBA1B-208ENST00000552984 SDK1Q7Z5N4 2213 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 SPTLC2O15270 562 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 KINO60870 393 aaKnown RBP12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 KRT19P08727 400 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 HOXD13P35453 343 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 RPS9P46781 194 aaKnown RBP12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 TNK2Q07912 1038 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 FCHO2Q0JRZ9 810 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 GAS6Q14393 721 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 VEPH1Q14D04 833 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 SHC4Q6S5L8 630 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 Q6ZS52 159 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 TMEM150AQ86TG1 271 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 CBWD2Q8IUF1 395 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 THEM5Q8N1Q8 247 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 NELL2Q99435 816 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 GPR88Q9GZN0 384 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 LMAN1LQ9HAT1 526 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 MRPS17Q9Y2R5 130 aaKnown RBP12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 ASB3Q9Y575 518 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 MORC2Q9Y6X9 1032 aaPredicted RBP12.38□□□□□ -0.43
TUBA1B-208ENST00000552984 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 CHADO15335 359 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 NCAM2O15394 837 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 EXTL3O43909 919 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 CHRNB1P11230 501 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 TDGF1P13385 188 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 HMGA1P17096 107 aaKnown RBP12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 GARTP22102 1010 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 PAX3P23760 479 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 MAGEA9P43362 315 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 SATB1Q01826 763 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 PKP1Q13835 747 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 ZNF528Q3MIS6 628 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 RIN3Q8TB24 985 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 CSGALNACT1Q8TDX6 532 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 PKMYT1Q99640 499 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 SLC46A2Q9BY10 475 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 SEMA4AQ9H3S1 761 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 ZSCAN16Q9H4T2 348 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 TRPV5Q9NQA5 729 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 C2orf42Q9NWW7 574 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 HSFX1Q9UBD0 423 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 MAGED2Q9UNF1 606 aaPredicted RBP12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 CCL26Q9Y258 94 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 SNX9Q9Y5X1 595 aa12.37□□□□□ -0.43
TUBA1B-208ENST00000552984 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms