RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 SOAT2O75908 522 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 NFICP08651 508 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 GABRR2P28476 465 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ANP32AP39687 249 aaKnown RBP12.81□□□□□ -0.36
CKAP4-202ENST00000552828 FNTBP49356 437 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ARHGAP15Q53QZ3 475 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 GPR158Q5T848 1215 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 PRR23BQ6ZRT6 265 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 Q6ZS52 159 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 GPBP1Q86WP2 473 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 KRI1Q8N9T8 703 aaKnown RBP12.81□□□□□ -0.36
CKAP4-202ENST00000552828 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
CKAP4-202ENST00000552828 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ZFYVE19Q96K21 471 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 CCSER1Q9C0I3 900 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ST6GALNAC4Q9H4F1 302 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ASB7Q9H672 318 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 SEMA4GQ9NTN9 838 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 C2orf42Q9NWW7 574 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ZMYM5Q9UJ78 669 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 FBXO2Q9UK22 296 aaPredicted RBP12.81□□□□□ -0.36
CKAP4-202ENST00000552828 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 C2CD2Q9Y426 696 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 ATP6V1DQ9Y5K8 247 aa12.81□□□□□ -0.36
CKAP4-202ENST00000552828 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.81□□□□□ -0.36
CKAP4-202ENST00000552828 CACNA1BQ00975 2339 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 TICRRQ7Z2Z1 1910 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 K7ENM7 598 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 SPTLC2O15270 562 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 FAM13AO94988 1023 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 YEATS4O95619 227 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 ATF6P18850 670 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 CDC25CP30307 473 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 GRIN1Q05586 938 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 TMEM132DQ14C87 1099 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 SLC39A12Q504Y0 691 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 WDR5BQ86VZ2 330 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 GPIHBP1Q8IV16 184 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 RASSF8Q8NHQ8 419 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 FAM83CQ9BQN1 747 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 SLC46A2Q9BY10 475 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 ZDHHC9Q9Y397 364 aa12.8□□□□□ -0.36
CKAP4-202ENST00000552828 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 ANKRD63C9JTQ0 380 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 CYB561D2O14569 222 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 PPP6R2O75170 966 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 ADRB1P08588 477 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 TXLNAP40222 546 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 NUCB2P80303 420 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 DNM1Q05193 864 aaKnown RBP12.79□□□□□ -0.36
CKAP4-202ENST00000552828 TNK2Q07912 1038 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 SRSF5Q13243 272 aaKnown RBP12.79□□□□□ -0.36
CKAP4-202ENST00000552828 VEPH1Q14D04 833 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 PON2Q15165 354 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 ITPRIPL2Q3MIP1 535 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 SLFN12LQ6IEE8 588 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 PRR23CQ6ZRP0 262 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 TMEM150AQ86TG1 271 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 LRRTM3Q86VH5 581 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 CMTM8Q8IZV2 173 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 TTC8Q8TAM2 541 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 FAM200AQ8TCP9 573 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 SPPL2BQ8TCT7 592 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 RAD54LQ92698 747 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
CKAP4-202ENST00000552828 SEPT5Q99719 369 aaPredicted RBP12.79□□□□□ -0.36
CKAP4-202ENST00000552828 THG1LQ9NWX6 298 aaKnown RBP12.79□□□□□ -0.36
CKAP4-202ENST00000552828 CCDC163A0A0D9SF12 145 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 HAPLN1P10915 354 aaPredicted RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 PLCG1P19174 1290 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 NMT1P30419 496 aaKnown RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 ACOT2P49753 483 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 TAF6P49848 677 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 CYP4F8P98187 520 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 MCM6Q14566 821 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 MGAT5BQ3V5L5 792 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 TMEM196Q5HYL7 178 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 ADALQ6DHV7 355 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 CRELD2Q6UXH1 353 aaPredicted RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 NT5DC4Q86YG4 428 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 EPSTI1Q96J88 318 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 LOXL4Q96JB6 756 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 DPP3Q9NY33 737 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
CKAP4-202ENST00000552828 AGO2Q9UKV8 859 aaKnown RBP12.78□□□□□ -0.36
CKAP4-202ENST00000552828 TISP43B9A030 160 aa12.77□□□□□ -0.37
CKAP4-202ENST00000552828 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms