RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ARMCX3Q9UH62 379 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-216ENST00000552301 C2CD4DB7Z1M9 353 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 HLA-DRAP01903 254 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 FSHRP23945 695 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 ACAT1P24752 427 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 GTF2H1P32780 548 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 ALDH1A3P47895 512 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 MXI1P50539 228 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 STX17P56962 302 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 PABPC1LQ4VXU2 614 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 INTS6LQ5JSJ4 861 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 FOXR2Q6PJQ5 311 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 OSTM1Q86WC4 334 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 PLCD3Q8N3E9 789 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 SPPL2BQ8TCT7 592 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 TAF4BQ92750 862 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 SEPT5Q99719 369 aaPredicted RBP19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 XYLT2Q9H1B5 865 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 VRTNQ9H8Y1 702 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 METTL14Q9HCE5 456 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 TMEM8AQ9HCN3 771 aa19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 ABI2Q9NYB9 513 aaPredicted RBP19.79■□□□□ 0.76
PRPF40B-216ENST00000552301 GABRDO14764 452 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 VNN1O95497 513 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 FGFR1OPO95684 399 aaKnown RBP19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 MBD3O95983 291 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 WARSP23381 471 aaKnown RBP19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 TUFMP49411 452 aaKnown RBP19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 EPHB3P54753 998 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 PPP3CAQ08209 521 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 MGAT5BQ3V5L5 792 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 C1orf220Q5T0J3 134 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 KRT39Q6A163 491 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 TTI2Q6NXR4 508 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 SCARA5Q6ZMJ2 495 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 RNF135Q8IUD6 432 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 OR6B3Q8NGW1 331 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 ZNF512Q96ME7 567 aaPredicted RBP19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 SYT15Q9BQS2 421 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 HSFX1Q9UBD0 423 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 SLC27A5Q9Y2P5 690 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 PCDHB5Q9Y5E4 795 aa19.78■□□□□ 0.76
PRPF40B-216ENST00000552301 TACC1O75410 805 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 FAM163BP0C2L3 166 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 PTPN2P17706 415 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 NTHL1P78549 312 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 VEPH1Q14D04 833 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 MLKLQ8NB16 471 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 FAM200AQ8TCP9 573 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 KBTBD7Q8WVZ9 684 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 CORO1BQ9BR76 489 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 MRPL45Q9BRJ2 306 aaKnown RBP19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 HCFC1R1Q9NWW0 138 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 DNMT3BQ9UBC3 853 aaKnown RBP19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 DACH1Q9UI36 760 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 CDH9Q9ULB4 789 aa19.77■□□□□ 0.76
PRPF40B-216ENST00000552301 VNN2O95498 520 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 RHOP08100 348 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 GNL1P36915 607 aaPredicted RBP19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 CDR1P51861 262 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 MAPRE1Q15691 268 aaKnown RBP19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 CYP4A22Q5TCH4 519 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 LIMS2Q7Z4I7 341 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 FILIP1Q7Z7B0 1213 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 LRRTM3Q86VH5 581 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 SPATA2LQ8IUW3 424 aaPredicted RBP19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 ZDHHC14Q8IZN3 488 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 LEMD2Q8NC56 503 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 GPT2Q8TD30 523 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 TAS1R2Q8TE23 839 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 DUSP9Q99956 384 aaKnown RBP19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 CRISPLD1Q9H336 500 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 SMYD3Q9H7B4 428 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 ASAH2Q9NR71 780 aa19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 MRPS23Q9Y3D9 190 aaKnown RBP19.76■□□□□ 0.75
PRPF40B-216ENST00000552301 DOCK6Q96HP0 2047 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 DCXO43602 365 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 HCRTO43612 131 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 GNA14O95837 355 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 ASS1P00966 412 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 PDGFRBP09619 1106 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 ALADP13716 330 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 PSMC1P62191 440 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 NOP14P78316 857 aaKnown RBP19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 TAF12Q16514 161 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 C4orf50Q6ZRC1 276 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 PDZD4Q76G19 769 aaPredicted RBP19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 FRMD5Q7Z6J6 570 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 ITIH5Q86UX2 942 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 TTC9BQ8N6N2 239 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 PI4K2AQ9BTU6 479 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 MUTYHQ9UIF7 546 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 RWDD2AQ9UIY3 292 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 GTF3C4Q9UKN8 822 aa19.75■□□□□ 0.75
PRPF40B-216ENST00000552301 A8MXQ7 604 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 ZNF197O14709 1029 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 SOAT2O75908 522 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 TRIM21P19474 475 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms