RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 SATB1Q01826 763 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 ALCAMQ13740 583 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 DHX8Q14562 1220 aaKnown RBP17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 RSPO4Q2I0M5 234 aaPredicted RBP17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 SLC39A12Q504Y0 691 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 GPR158Q5T848 1215 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 TXNDC11Q6PKC3 985 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 METTL23Q86XA0 190 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 SFR1Q86XK3 245 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 BRSK2Q8IWQ3 736 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 THEM5Q8N1Q8 247 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 CXorf38Q8TB03 319 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 BPIFB1Q8TDL5 484 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 KIF9Q9HAQ2 790 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 ABCB6Q9NP58 842 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 FBXO2Q9UK22 296 aaPredicted RBP17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 GMEB2Q9UKD1 530 aa17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
CALCOCO1-220ENST00000552282 SLC38A8A6NNN8 435 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 SOAT2O75908 522 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 RETP07949 1114 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 HMGA1P17096 107 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 GARTP22102 1010 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 USP49Q70CQ1 688 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 TMEM150AQ86TG1 271 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 LRRTM3Q86VH5 581 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 DCP1BQ8IZD4 617 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 LRRC52Q8N7C0 313 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 RASSF8Q8NHQ8 419 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 PYM1Q9BRP8 204 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 PARD6AQ9NPB6 346 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 EXOC7Q9UPT5 735 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 EPG5Q9HCE0 2579 aa17.39■□□□□ 0.37
CALCOCO1-220ENST00000552282 CCDC163A0A0D9SF12 145 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 DPYSL4O14531 572 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 LDHAP00338 332 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 F11P03951 625 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 KPNA1P52294 538 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 ZNF268Q14587 947 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 NFE2Q16621 373 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 MGAT5BQ3V5L5 792 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 WSCD1Q658N2 575 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 LONP2Q86WA8 852 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 POMGNT1Q8WZA1 660 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 TRMT2BQ96GJ1 504 aaKnown RBP17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 GCNAQ96QF7 691 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 PKMYT1Q99640 499 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 SEPT5Q99719 369 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 FAM83CQ9BQN1 747 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 RTKNQ9BST9 563 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 GDAP2Q9NXN4 497 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
CALCOCO1-220ENST00000552282 SPTBN2O15020 2390 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 MYMKA6NI61 221 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 FOXD2O60548 495 aaPredicted RBP17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 SOX9P48436 509 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 CYP4F8P98187 520 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 RESTQ13127 1097 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 ITPRIPL2Q3MIP1 535 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 CMTM8Q8IZV2 173 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 TMEM86AQ8N2M4 240 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 C1orf127Q8N9H9 656 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 MYRFLQ96LU7 910 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 ACBD6Q9BR61 282 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 SLC46A2Q9BY10 475 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 GTSE1Q9NYZ3 720 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 RAB23Q9ULC3 237 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 PCDHB5Q9Y5E4 795 aa17.37■□□□□ 0.37
CALCOCO1-220ENST00000552282 TPRP12270 2363 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 ACACBO00763 2458 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 KIAA0391O15091 583 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 CSH1P0DML2 217 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 CSH2P0DML3 217 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 ATXN1P54253 815 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 WNT7BP56706 349 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 NLRP12P59046 1061 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 CFAP221Q4G0U5 840 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 Q6ZS52 159 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 LIMS2Q7Z4I7 341 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 WDR5BQ86VZ2 330 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 CHFRQ96EP1 664 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 ACCSQ96QU6 501 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 IKZF4Q9H2S9 585 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 MRPL44Q9H9J2 332 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 RBM12Q9NTZ6 932 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 THG1LQ9NWX6 298 aaKnown RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 ITGA11Q9UKX5 1188 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 CLIC4Q9Y696 253 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 KMT2BQ9UMN6 2715 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 SPAG17Q6Q759 2223 aa17.36■□□□□ 0.37
CALCOCO1-220ENST00000552282 KIAA1549LQ6ZVL6 1849 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 GREB1Q4ZG55 1949 aa17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 TRDMT1O14717 391 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-220ENST00000552282 GABRDO14764 452 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms