RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 FEZ2Q9UHY8 353 aaPredicted RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 CYTH4Q9UIA0 394 aa14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 R3HDM2Q9Y2K5 976 aaKnown RBP14.84□□□□□ -0.03
RAB3IP-216ENST00000552199 NRCAMQ92823 1304 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 F8VP50 259 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 GPR32O75388 356 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 F2P00734 622 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 SMIM10L2AP0DMW4 78 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 SMIM10L2BP0DMW5 78 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 HOXA11P31270 313 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 GJC1P36383 396 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 CETN2P41208 172 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 KRT17Q04695 432 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 ORC1Q13415 861 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 NIPA2Q8N8Q9 360 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 GRK7Q8WTQ7 553 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 ATG4AQ8WYN0 398 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 KAT2BQ92831 832 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 KIF12Q96FN5 646 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 GCOM2Q9BZD3 368 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 FAM49AQ9H0Q0 323 aaPredicted RBP14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
RAB3IP-216ENST00000552199 SMIM35A0A1B0GVV1 85 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 SIGLEC16A6NMB1 481 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 NPTXRO95502 500 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 TCF4P15884 667 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 PMS2P54278 862 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 HUNKP57058 714 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 NFX1Q12986 1120 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 CCNG2Q16589 344 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 ATP13A4Q4VNC1 1196 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 KDM7AQ6ZMT4 941 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 RUFY4Q6ZNE9 571 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 APBB1IPQ7Z5R6 666 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 ANKS1BQ7Z6G8 1248 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 ATL2Q8NHH9 583 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 RNF25Q96BH1 459 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 RBM41Q96IZ5 413 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 CAPS2Q9BXY5 557 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 EPB41L4BQ9H329 900 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 FAM124BQ9H5Z6 455 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 PLEKHA5Q9HAU0 1116 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 CDHR5Q9HBB8 845 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 FLRT1Q9NZU1 646 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 WHRNQ9P202 907 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 TRIP11Q15643 1979 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 MBLAC1A4D2B0 266 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 IGF2BP3O00425 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 ZNF865P0CJ78 1059 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 VDRP11473 427 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 IRAK1P51617 712 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 EIF3BP55884 814 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 TMEM62Q0P6H9 643 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 PTK6Q13882 451 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 CNGA2Q16280 664 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 ZSCAN26Q16670 478 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 DNAJC21Q5F1R6 531 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 OLFML2BQ68BL8 750 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 LRRC31Q6UY01 552 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 CATSPER4Q7RTX7 472 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 PKNOX2Q96KN3 472 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 PABPC3Q9H361 631 aaKnown RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 WDR35Q9P2L0 1181 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 TJP2Q9UDY2 1190 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 BARX2Q9UMQ3 279 aaPredicted RBP14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 DERAQ9Y315 318 aa14.82□□□□□ -0.04
RAB3IP-216ENST00000552199 RALGAPA2Q2PPJ7 1873 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 A6NNZ2 444 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 PI4K2BG5E9Z4 385 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 GOLGA8SH3BPF8 625 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 MICAL2O94851 1124 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 CYP2C9P11712 490 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 KRT3P12035 628 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 RFC1P35251 1148 aaPredicted RBP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 HNRNPH2P55795 449 aaKnown RBP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 GSCP56915 257 aaPredicted RBP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 PSMC1P62191 440 aaKnown RBP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 INCA1Q0VD86 236 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 CALCOCO2Q13137 446 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 TUBB8Q3ZCM7 444 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 AGBL2Q5U5Z8 902 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 SLC27A1Q6PCB7 646 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 TTC39CQ8N584 583 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 HEXIM2Q96MH2 286 aaKnown RBP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 SLITRK1Q96PX8 696 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 CPXM1Q96SM3 734 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 GINS2Q9Y248 185 aa14.81□□□□□ -0.04
RAB3IP-216ENST00000552199 GAS8O95995 478 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 HMGCRP04035 888 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 KRT1P04264 644 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 NUDT17P0C025 328 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 DARSP14868 501 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 ITIH2P19823 946 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 NR1D1P20393 614 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 IVDP26440 423 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 NDST1P52848 882 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms