RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 TBX20Q9UMR3 447 aa15.36■□□□□ 0.05
CHMP1A-210ENST00000551981 DERAQ9Y315 318 aa15.36■□□□□ 0.05
CHMP1A-210ENST00000551981 PCDHGA5Q9Y5G8 931 aa15.36■□□□□ 0.05
CHMP1A-210ENST00000551981 TCHHQ07283 1943 aa15.36■□□□□ 0.05
CHMP1A-210ENST00000551981 DENND4CQ5VZ89 1909 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 NPHP3-ACAD11A0A0J9YXS1 232 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 K7ENM7 598 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 FAM189A1O60320 539 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 PIGRP01833 764 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 CYP11A1P05108 521 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 ATF6P18850 670 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 DDX6P26196 483 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 PMLP29590 882 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 ABCD1P33897 745 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 PXNP49023 591 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 BFSP1Q12934 665 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 RUNX3Q13761 415 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 TMEM132DQ14C87 1099 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 CCDC6Q16204 474 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 RILPL1Q5EBL4 403 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 TMEM196Q5HYL7 178 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 N4BP2L1Q5TBK1 243 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 STPG1Q5TH74 334 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 KBTBD6Q86V97 674 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 CMTM8Q8IZV2 173 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 CAMKK1Q8N5S9 505 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 SPPL2BQ8TCT7 592 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 PLIN2Q99541 437 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 FAM83CQ9BQN1 747 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 SLC46A2Q9BY10 475 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 KIF9Q9HAQ2 790 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 IL21Q9HBE4 155 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 GKN1Q9NS71 199 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 LAMA1P25391 3075 aa15.35■□□□□ 0.05
CHMP1A-210ENST00000551981 A0A0B4J269 797 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 PIRO00625 290 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 TRDMT1O14717 391 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 SHC2P98077 582 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 ATP2C1P98194 919 aaPredicted RBP15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 FSTL4Q6MZW2 842 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 CC2D1AQ6P1N0 951 aaPredicted RBP15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 MYCT1Q8N699 235 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 GIPC2Q8TF65 315 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 ZC3H10Q96K80 434 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 VPS45Q9NRW7 570 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 CPSF3Q9UKF6 684 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
CHMP1A-210ENST00000551981 EML5Q05BV3 1969 aa15.33■□□□□ 0.05
CHMP1A-210ENST00000551981 SCN1AP35498 2009 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 ATG2BQ96BY7 2078 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 VWA3AA6NCI4 1184 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 SOBPA7XYQ1 873 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 CYB561D2O14569 222 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 TM4SF5O14894 197 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 FAM13AO94988 1023 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 NFICP08651 508 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 HAPLN1P10915 354 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 DRD1P21728 446 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 HOXC13P31276 330 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 MPLP40238 635 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 TAF6P49848 677 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 TMEM119Q4V9L6 283 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 ARSHQ5FYA8 562 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 PLA2G2CQ5R387 149 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 MCTP1Q6DN14 999 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 PKN3Q6P5Z2 889 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 DCP1BQ8IZD4 617 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 REEP2Q9BRK0 252 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 PYM1Q9BRP8 204 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 EBF3Q9H4W6 596 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 ASB7Q9H672 318 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 PARVGQ9HBI0 331 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 HPS4Q9NQG7 708 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 TDP1Q9NUW8 608 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 ABI2Q9NYB9 513 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 C2CD2Q9Y426 696 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 OBSL1O75147 1896 aa15.33■□□□□ 0.04
CHMP1A-210ENST00000551981 ANO9A1A5B4 782 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 SLC26A4O43511 780 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 RNF40O75150 1001 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 KRT18P05783 430 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 NLRP12P59046 1061 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 PDGFRLQ15198 375 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 ELF2Q15723 593 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 FBXO43Q4G163 708 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 ARL6IP4Q66PJ3 421 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 GPBP1Q86WP2 473 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 MAB21L3Q8N8X9 362 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 MRPS31Q92665 395 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 USP13Q92995 863 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 RXFP3Q9NSD7 469 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 CCL26Q9Y258 94 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 PCDHB5Q9Y5E4 795 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 FRYQ5TBA9 3013 aa15.32■□□□□ 0.04
CHMP1A-210ENST00000551981 TRAK2O60296 914 aa15.31■□□□□ 0.04
CHMP1A-210ENST00000551981 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
CHMP1A-210ENST00000551981 KCNK5O95279 499 aa15.31■□□□□ 0.04
CHMP1A-210ENST00000551981 EGFP01133 1207 aa15.31■□□□□ 0.04
CHMP1A-210ENST00000551981 NEFLP07196 543 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms