RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ERC2O15083 957 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PRPF3O43395 683 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 NRP2O60462 931 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 NDUFS2O75306 463 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PCDH8O95206 1070 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 MPIG6BO95866 241 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 CD4P01730 458 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 MYL1P05976 194 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PFKMP08237 780 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 LINC00271P0C7V0 271 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 JUNBP17275 347 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 CYP2B6P20813 491 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 CST5P28325 142 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 GNALP38405 381 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 KCNJ4P48050 445 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 GLRBP48167 497 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 ADKP55263 362 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 NRG3P56975 720 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 KIF22Q14807 665 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 MUM1Q2TAK8 710 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 ARHGAP29Q52LW3 1261 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 RRP12Q5JTH9 1297 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 IFIT1BQ5T764 474 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PPP4R4Q6NUP7 873 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 LRSAM1Q6UWE0 723 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 FAM180AQ6UWF9 173 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 UNQ6494/PRO21346Q6UXR6 183 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 LIPIQ6XZB0 460 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 CXXC5Q7LFL8 322 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 KCNK18Q7Z418 384 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PROSER1Q86XN7 944 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 FOXP4Q8IVH2 680 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 ABRAQ8N0Z2 381 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PPM1NQ8N819 430 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 SPATA5Q8NB90 893 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 GPRC5AQ8NFJ5 357 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 SMARCC2Q8TAQ2 1214 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 GAB3Q8WWW8 586 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 FATE1Q969F0 183 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 LRGUKQ96M69 825 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 TOX2Q96NM4 488 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 AIFM3Q96NN9 605 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 CLIC6Q96NY7 704 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 DIRC2Q96SL1 478 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 NOL10Q9BSC4 688 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 MOV10L1Q9BXT6 1211 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 ACE2Q9BYF1 805 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 OR10A5Q9H207 317 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 EPB41L4BQ9H329 900 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 KCTD10Q9H3F6 313 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 MTG2Q9H4K7 406 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 NSUN3Q9H649 340 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 IFT122Q9HBG6 1241 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 DCP1AQ9NPI6 582 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 GPR108Q9NPR9 543 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 C9orf78Q9NZ63 289 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PI4KBQ9UBF8 816 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 DDX20Q9UHI6 824 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 SAP30BPQ9UHR5 308 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 DBNLQ9UJU6 430 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 PCDHB6Q9Y5E3 794 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 LRRFIP2Q9Y608 721 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 OAS3Q9Y6K5 1087 aaKnown RBP2.83□□□□□ -1.96
CPSF6-207ENST00000551516 BRWD1Q9NSI6 2320 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 ZBED9Q6R2W3 1325 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 CACNA1AO00555 2505 aa2.83□□□□□ -1.96
CPSF6-207ENST00000551516 LTBP2Q14767 1821 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SPEF2Q9C093 1822 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TEX51A0A1B0GUA7 166 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 ZNF503-AS2A6NEH8 195 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 EPOPA6NHQ4 379 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 VSTM5A8MXK1 200 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SEPT4O43236 478 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 AP1G1O43747 822 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 CUTAO60888 179 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 OPHN1O60890 802 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 OFD1O75665 1012 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 ZRANB2O95218 330 aaKnown RBP eCLIP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PAPLNO95428 1278 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 C8BP07358 591 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 ASNSP08243 561 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 POU2F2P09086 479 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 SLC5A1P13866 664 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TRIM27P14373 513 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 C5AR1P21730 350 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 MAPK4P31152 587 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 MC3RP41968 323 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 NCKAP1LP55160 1127 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DYNLL1P63167 89 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 CCT2P78371 535 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 ATP8B2P98198 1209 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TLE2Q04725 743 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 PPARAQ07869 468 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 OS9Q13438 667 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 HDAC1Q13547 482 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TRIM25Q14258 630 aaKnown RBP2.82□□□□□ -1.96
CPSF6-207ENST00000551516 DGKDQ16760 1214 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 TCTN1Q2MV58 587 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 UAP1L1Q3KQV9 507 aa2.82□□□□□ -1.96
CPSF6-207ENST00000551516 WDR72Q3MJ13 1102 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms