RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PYGMP11217 842 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 FGFR1P11362 822 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 PTK7Q13308 1070 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 ERICH1Q86X53 443 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 GSPT2Q8IYD1 628 aaKnown RBP20.89■□□□□ 0.93
SSH1-209ENST00000551165 GLT1D1Q96MS3 346 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 PPP1R10Q96QC0 940 aaKnown RBP20.89■□□□□ 0.93
SSH1-209ENST00000551165 CARD9Q9H257 536 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 DPEP3Q9H4B8 488 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 ARGLU1Q9NWB6 273 aaPredicted RBP20.89■□□□□ 0.93
SSH1-209ENST00000551165 TRIM17Q9Y577 477 aa20.89■□□□□ 0.93
SSH1-209ENST00000551165 A0A1W2PQ45 241 aaPredicted RBP20.88■□□□□ 0.93
SSH1-209ENST00000551165 A0A1W2PQY0 241 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 ZSCAN5CA6NGD5 496 aaPredicted RBP20.88■□□□□ 0.93
SSH1-209ENST00000551165 GNRH1P01148 92 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 MYBL2P10244 700 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 CTNNA1P35221 906 aaKnown RBP20.88■□□□□ 0.93
SSH1-209ENST00000551165 AGMOQ6ZNB7 445 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 SLAIN1Q8ND83 568 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 NT5C1AQ9BXI3 368 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 ZNF518BQ9C0D4 1074 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 LHX5Q9H2C1 402 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 PCDHA3Q9Y5H8 950 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 KPNA7A9QM74 516 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 M0QYV0 167 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 GPR182O15218 404 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 MED7O43513 233 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 ZRANB2O95218 330 aaKnown RBP eCLIP20.88■□□□□ 0.93
SSH1-209ENST00000551165 OGDHQ02218 1023 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 ZNF252P-AS1Q0IIN9 211 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 TMCO3Q6UWJ1 677 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 FEZF2Q8TBJ5 459 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 KBTBD7Q8WVZ9 684 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 WNT8AQ9H1J5 351 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 FAM49BQ9NUQ9 324 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 PARVAQ9NVD7 372 aa20.88■□□□□ 0.93
SSH1-209ENST00000551165 CCDC151A5D8V7 595 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 MIF4GDA9UHW6 222 aaKnown RBP20.87■□□□□ 0.93
SSH1-209ENST00000551165 PIK3R2O00459 728 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 KRIT1O00522 736 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 CD4P01730 458 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 VDRP11473 427 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 LMO2P25791 158 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 CDR1P51861 262 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 WDR93Q6P2C0 686 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 ZDHHC14Q8IZN3 488 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 UBL4BQ8N7F7 174 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 RNF169Q8NCN4 708 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 DDX47Q9H0S4 455 aaKnown RBP20.87■□□□□ 0.93
SSH1-209ENST00000551165 CHST12Q9NRB3 414 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 GOLGA8SH3BPF8 625 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 CABYRO75952 493 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 PROSCO94903 275 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 ERBB2P04626 1255 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 PDGFRBP09619 1106 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 GPD2P43304 727 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 PAK2Q13177 524 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 BRD3Q15059 726 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 CNGA2Q16280 664 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 SGO2Q562F6 1265 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 PPP1R26Q5T8A7 1209 aaPredicted RBP20.87■□□□□ 0.93
SSH1-209ENST00000551165 C8orf74Q6P047 294 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 OR6B3Q8NGW1 331 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 MCEEQ96PE7 176 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 MRPL47Q9HD33 250 aaKnown RBP20.87■□□□□ 0.93
SSH1-209ENST00000551165 TSPAN16Q9UKR8 245 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 CEP83Q9Y592 693 aa20.87■□□□□ 0.93
SSH1-209ENST00000551165 TCRBV7S2A1N4TA0A589 114 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 TARSL2A2RTX5 802 aaKnown RBP20.86■□□□□ 0.93
SSH1-209ENST00000551165 TMEM191CA6NGB0 347 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 TULP2O00295 520 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 CALB1P05937 261 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 GLI1P08151 1106 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 PFKMP08237 780 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 TCF4P15884 667 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 CTNNA2P26232 953 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 TAS2R40P59535 323 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 LILRA4P59901 499 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 LONRF2Q1L5Z9 754 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 PPP1R15BQ5SWA1 713 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 ZBTB9Q96C00 473 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 L1RE1Q9UN81 338 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 USTQ9Y2C2 406 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 MOXD2PA6NHM9 499 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 CKBP12277 381 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 ATF7P17544 494 aaPredicted RBP20.86■□□□□ 0.93
SSH1-209ENST00000551165 MBTPS1Q14703 1052 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 DNAJC24Q6P3W2 148 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 TTC7AQ9ULT0 858 aaPredicted RBP20.86■□□□□ 0.93
SSH1-209ENST00000551165 SCINQ9Y6U3 715 aa20.86■□□□□ 0.93
SSH1-209ENST00000551165 FRMPD3Q5JV73 1810 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 ARL5CA6NH57 179 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 RAD51CO43502 376 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 SASH3O75995 380 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 SCNN1GP51170 649 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 DSC3Q14574 896 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 TRADDQ15628 312 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 CCDC142Q17RM4 750 aa20.85■□□□□ 0.93
SSH1-209ENST00000551165 BEND6Q5SZJ8 279 aaPredicted RBP20.85■□□□□ 0.93
SSH1-209ENST00000551165 TRAF7Q6Q0C0 670 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms