RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TNNC1P63316 161 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 ZXDAP98168 799 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 TWF1Q12792 350 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 DUSP4Q13115 394 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 NCOA4Q13772 614 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 NFE2Q16621 373 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 ZNF699Q32M78 642 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 C1orf220Q5T0J3 134 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 IQCEQ6IPM2 695 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 SV2AQ7L0J3 742 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 OSTM1Q86WC4 334 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 LEMD2Q8NC56 503 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 KBTBD7Q8WVZ9 684 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 CRISPLD1Q9H336 500 aa16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 DNMT3BQ9UBC3 853 aaKnown RBP16.53■□□□□ 0.24
PRPF40B-211ENST00000551063 TMEM221A6NGB7 291 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 M0R296 226 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 N4BP1O75113 896 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 RHOP08100 348 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 PTPN2P17706 415 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 GTF2H1P32780 548 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 TUFMP49411 452 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 NTHL1P78549 312 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 WDR72Q3MJ13 1102 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 LRRTM3Q86VH5 581 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 TAF4BQ92750 862 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 MYADMQ96S97 322 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 MMS19Q96T76 1030 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 CDH7Q9ULB5 785 aa16.52■□□□□ 0.24
PRPF40B-211ENST00000551063 BICDL2A1A5D9 508 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 TRIM49BA6NDI0 452 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 VNN1O95497 513 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 BMP6P22004 513 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ALDH1A3P47895 512 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 EPHB3P54753 998 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 EPHA5P54756 1037 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 SIGLEC14Q08ET2 396 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ZNF667Q5HYK9 610 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 NXPE3Q969Y0 559 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 PBXIP1Q96AQ6 731 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ZNF512Q96ME7 567 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 PKMYT1Q99640 499 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 CLSTN2Q9H4D0 955 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ABCB6Q9NP58 842 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ASAH2Q9NR71 780 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 HCFC1R1Q9NWW0 138 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 CEP72Q9P209 647 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 IGSF9Q9P2J2 1179 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 CDH9Q9ULB4 789 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 SORCS3Q9UPU3 1222 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 PCDHB5Q9Y5E4 795 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 C2orf16Q68DN1 1984 aa16.51■□□□□ 0.23
PRPF40B-211ENST00000551063 MUC6Q6W4X9 2439 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 BIN1O00499 593 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 ZNF197O14709 1029 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 STX10O60499 249 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 MICAL2O94851 1124 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 ASS1P00966 412 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 LAMP2P13473 410 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 P4HA1P13674 534 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 PIK3CAP42336 1068 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 GCLMP48507 274 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 CAMK4Q16566 473 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 MGAT5BQ3V5L5 792 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 CYP4A22Q5TCH4 519 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 PDZD4Q76G19 769 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 TTC9BQ8N6N2 239 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 FGF13Q92913 245 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 FUBP3Q96I24 572 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 SEPT5Q99719 369 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 SYT15Q9BQS2 421 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 CORO1BQ9BR76 489 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 MRPL45Q9BRJ2 306 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 IMPG2Q9BZV3 1241 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 ABI2Q9NYB9 513 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 LIMD1Q9UGP4 676 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 SLC27A5Q9Y2P5 690 aa16.5■□□□□ 0.23
PRPF40B-211ENST00000551063 GOLGA6L22H0YM25 854 aa16.49■□□□□ 0.23
PRPF40B-211ENST00000551063 CLSTN1O94985 981 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms