RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 FPR1P21462 350 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 CASRP41180 1078 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 GRK6P43250 576 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 PHKA1P46020 1223 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ATP8B2P98198 1209 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 APBA1Q02410 837 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 PTH1RQ03431 593 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 EXOSC9Q06265 439 aaKnown RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 TROQ12816 1431 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 PMS2P11Q13670 270 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 BLMHQ13867 455 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ALFQ53S48 1182 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 PRAMEF14Q5SWL7 426 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 CCDC70Q6NSX1 233 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 Q6ZUG5 572 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ZDHHC14Q8IZN3 488 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ANKRD53Q8N9V6 530 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 KBTBD7Q8WVZ9 684 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 TMEM41AQ96HV5 264 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 ZC3H10Q96K80 434 aaKnown RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 CAPNS2Q96L46 248 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 MRGPRX1Q96LB2 322 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 BRIP1Q9BX63 1249 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 MAF1Q9H063 256 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 KIAA1683Q9H0B3 1180 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 MYLK2Q9H1R3 596 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 BRD9Q9H8M2 597 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 CASS4Q9NQ75 786 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 CTDP1Q9Y5B0 961 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 DGKBQ9Y6T7 804 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 BRD4O60885 1362 aaPredicted RBP6.29□□□□□ -1.4
CPSF6-206ENST00000550987 PAPPA2Q9BXP8 1791 aa6.29□□□□□ -1.4
CPSF6-206ENST00000550987 EPG5Q9HCE0 2579 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 CFAP47Q6ZTR5 3102 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 TIAM2Q8IVF5 1701 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 TNS3Q68CZ2 1445 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 NT5C1B-RDH14C9J2C7 533 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 F8W8V4 182 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 BTN3A1O00481 513 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 KIAA0391O15091 583 aaKnown RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 VSIG10L2P0DP72 767 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 CD53P19397 219 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 GUCY1A2P33402 732 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 SARSP49591 514 aaKnown RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 MXRA7P84157 204 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 SLC13A2Q13183 592 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 SP140Q13342 867 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 HABP2Q14520 560 aaPredicted RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 USP10Q14694 798 aaKnown RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 MLANAQ16655 118 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 PABPC1LQ4VXU2 614 aaKnown RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 CBLL1Q75N03 491 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 BEND5Q7L4P6 421 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 FAM90A1Q86YD7 464 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 REXO1L1PQ8IX06 675 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 AOPEPQ8N6M6 819 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 IQCDQ96DY2 449 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 COLEC11Q9BWP8 271 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 PACSIN1Q9BY11 444 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 SLC6A15Q9H2J7 730 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 SRRDQ9UH36 339 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 ITGB1BP2Q9UKP3 347 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 IRAK3Q9Y616 596 aa6.28□□□□□ -1.4
CPSF6-206ENST00000550987 OAS3Q9Y6K5 1087 aaKnown RBP6.28□□□□□ -1.4
CPSF6-206ENST00000550987 EEA1Q15075 1411 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 N4BP2Q86UW6 1770 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-206ENST00000550987 MYO1CO00159 1063 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 GRM6O15303 877 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 THAP12O43422 761 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 GNAI2P04899 355 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 THP07101 528 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF28P17035 718 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ATP5JP18859 108 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ALDH1A3P47895 512 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 HSPA7P48741 367 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 NPEPPSP55786 919 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 RPS16P62249 146 aaKnown RBP6.27□□□□□ -1.41
CPSF6-206ENST00000550987 RAB32Q13637 225 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 TUBB8Q3ZCM7 444 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF568Q3ZCX4 644 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 CCDC93Q567U6 631 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ZMAT1Q5H9K5 638 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 FAM47AQ5JRC9 791 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 AFMIDQ63HM1 303 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 LDHAL6AQ6ZMR3 332 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 USP30Q70CQ3 517 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 RNF44Q7L0R7 432 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 ZNF572Q7Z3I7 529 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-206ENST00000550987 MPP5Q8N3R9 675 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 LILRA3Q8N6C8 439 aaPredicted RBP6.27□□□□□ -1.41
CPSF6-206ENST00000550987 OR14K1Q8NGZ2 314 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 MUL1Q969V5 352 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 MSLNLQ96KJ4 702 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 TRIM54Q9BYV2 358 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 MTMR10Q9NXD2 777 aa6.27□□□□□ -1.41
CPSF6-206ENST00000550987 CFAP97Q9P2B7 532 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms