RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 XPNPEP1Q9NQW7 623 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
GPN3-208ENST00000550974 ASB3Q9Y575 518 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 HEMK1Q9Y5R4 338 aaPredicted RBP12.37□□□□□ -0.43
GPN3-208ENST00000550974 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 TEX15Q9BXT5 2789 aa12.37□□□□□ -0.43
GPN3-208ENST00000550974 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 TTLL13PA6NNM8 815 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 EML1O00423 815 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 N4BP3O15049 544 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 KLF8O95600 359 aaPredicted RBP12.36□□□□□ -0.43
GPN3-208ENST00000550974 JUPP14923 745 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 GNSP15586 552 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 MAOBP27338 520 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 CDC25CP30307 473 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 YWHABP31946 246 aaKnown RBP12.36□□□□□ -0.43
GPN3-208ENST00000550974 TIE1P35590 1138 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 MRPS21P82921 87 aaKnown RBP12.36□□□□□ -0.43
GPN3-208ENST00000550974 PTH1RQ03431 593 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
GPN3-208ENST00000550974 PKDCCQ504Y2 493 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 ZNF574Q6ZN55 896 aaPredicted RBP12.36□□□□□ -0.43
GPN3-208ENST00000550974 OTUD6AQ7L8S5 288 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 ITIH5Q86UX2 942 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 TMPRSS12Q86WS5 348 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 MAB21L3Q8N8X9 362 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 BEST2Q8NFU1 509 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 DDX12PQ92771 950 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 FGF11Q92914 225 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 NFKBIZQ9BYH8 718 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 FAM117AQ9C073 453 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 FZD8Q9H461 694 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 PDZD7Q9H5P4 517 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 CPNE5Q9HCH3 593 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 TDP1Q9NUW8 608 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 DUS2Q9NX74 493 aaKnown RBP12.36□□□□□ -0.43
GPN3-208ENST00000550974 SUSD2Q9UGT4 822 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 PTPRDP23468 1912 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 ARID2Q68CP9 1835 aa12.36□□□□□ -0.43
GPN3-208ENST00000550974 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
GPN3-208ENST00000550974 COL6A6A6NMZ7 2263 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 COL12A1Q99715 3063 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 ZBTB39O15060 712 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 FLRT2O43155 660 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 GLRA2P23416 452 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 LIFRP42702 1097 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 CLDN6P56747 220 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 SCRN1Q12765 414 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 EOGTQ5NDL2 527 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 APPL2Q8NEU8 664 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 TMEM176AQ96HP8 235 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 NAF1Q96HR8 494 aaKnown RBP12.35□□□□□ -0.43
GPN3-208ENST00000550974 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 ZMYND12Q9H0C1 365 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
GPN3-208ENST00000550974 KIF9Q9HAQ2 790 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 RBM28Q9NW13 759 aaKnown RBP12.35□□□□□ -0.43
GPN3-208ENST00000550974 BTBD3Q9Y2F9 522 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 USP20Q9Y2K6 914 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 WNT6Q9Y6F9 365 aa12.35□□□□□ -0.43
GPN3-208ENST00000550974 SMIM28A0A1B0GU29 152 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 TNFSF14O43557 240 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 CILPO75339 1184 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
GPN3-208ENST00000550974 MARCKSP29966 332 aaPredicted RBP12.34□□□□□ -0.43
GPN3-208ENST00000550974 MCM4P33991 863 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 MCM5P33992 734 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 ARL2P36404 184 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 IFNAR2P48551 515 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 USP11P51784 963 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 TMPRSS3P57727 454 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 FUT2Q10981 343 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 NFATC3Q12968 1075 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 NR1H3Q13133 447 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 MTF1Q14872 753 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 SYCP2LQ5T4T6 812 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 CENPPQ6IPU0 288 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 TTC9Q92623 222 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 SUSD3Q96L08 255 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 LGMNQ99538 433 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 PRMT7Q9NVM4 692 aaPredicted RBP12.34□□□□□ -0.43
GPN3-208ENST00000550974 FNDC3AQ9Y2H6 1198 aaKnown RBP12.34□□□□□ -0.43
GPN3-208ENST00000550974 PTPRQQ9UMZ3 2332 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 GON4LQ3T8J9 2241 aa12.34□□□□□ -0.43
GPN3-208ENST00000550974 MYO9AB2RTY4 2548 aa12.33□□□□□ -0.44
GPN3-208ENST00000550974 IGHV1OR15-9A0A0B4J2B8 117 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms