RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 SMYD5Q6GMV2 418 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 TRIM65Q6PJ69 517 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 ENOSF1Q7L5Y1 443 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 PALB2Q86YC2 1186 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 GLYCTKQ8IVS8 523 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 SLC22A17Q8WUG5 538 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 HDAC7Q8WUI4 952 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 ELMO3Q96BJ8 720 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 ZCWPW1Q9H0M4 648 aa22.91■■□□□ 1.26
NEK3-202ENST00000550841 BARX2Q9UMQ3 279 aaPredicted RBP22.91■■□□□ 1.26
NEK3-202ENST00000550841 PDGFRBP09619 1106 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 SLC9A1P19634 815 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 ELF1P32519 619 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 CLCN4P51793 760 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 ROR1Q01973 937 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 GCNT1Q02742 428 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 GPR17Q13304 367 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 LILRA6Q6PI73 481 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 RSPO2Q6UXX9 243 aaPredicted RBP22.9■■□□□ 1.26
NEK3-202ENST00000550841 RTL10Q7L3V2 364 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 APTXQ7Z2E3 356 aaKnown RBP22.9■■□□□ 1.26
NEK3-202ENST00000550841 OSTM1Q86WC4 334 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 PPM1KQ8N3J5 372 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 RNF214Q8ND24 703 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 ADAMTS19Q8TE59 1207 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 CASP10Q92851 521 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 JAKMIP2Q96AA8 810 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 TNIP3Q96KP6 325 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 RTP3Q9BQQ7 232 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 PLEKHA4Q9H4M7 779 aa22.9■■□□□ 1.26
NEK3-202ENST00000550841 CHD7Q9P2D1 2997 aa22.89■■□□□ 1.26
NEK3-202ENST00000550841 ADAM12O43184 909 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 ABLIM3O94929 683 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 LMO2P25791 158 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 RAP1GAPP47736 663 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 MFAP3P55082 362 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 FANCCQ00597 558 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 INCA1Q0VD86 236 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 ADAM15Q13444 863 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 NFE2Q16621 373 aaPredicted RBP22.89■■□□□ 1.25
NEK3-202ENST00000550841 INTS6LQ5JSJ4 861 aaKnown RBP22.89■■□□□ 1.25
NEK3-202ENST00000550841 TMEM184AQ6ZMB5 413 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 OR10T2Q8NGX3 314 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 C2orf15Q8WU43 125 aaKnown RBP22.89■■□□□ 1.25
NEK3-202ENST00000550841 SDCBP2Q9H190 292 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 UBE2TQ9NPD8 197 aaPredicted RBP22.89■■□□□ 1.25
NEK3-202ENST00000550841 RTN4Q9NQC3 1192 aaKnown RBP22.89■■□□□ 1.25
NEK3-202ENST00000550841 CISHQ9NSE2 258 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 APEX2Q9UBZ4 518 aa22.89■■□□□ 1.25
NEK3-202ENST00000550841 AFF4Q9UHB7 1163 aaKnown RBP22.89■■□□□ 1.25
NEK3-202ENST00000550841 TGM5O43548 720 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 UBASH3AP57075 661 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 KCNMA1Q12791 1236 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 AAK1Q2M2I8 961 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 PHLDB3Q6NSJ2 640 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 SYT15Q9BQS2 421 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 NT5C1AQ9BXI3 368 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 DAAM1Q9Y4D1 1078 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 HCFC2Q9Y5Z7 792 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 ATG2AQ2TAZ0 1938 aa22.88■■□□□ 1.25
NEK3-202ENST00000550841 WDR27A2RRH5 827 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 TPM3P06753 285 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 ATF2P15336 505 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 PTPN1P18031 435 aaKnown RBP22.87■■□□□ 1.25
NEK3-202ENST00000550841 CD58P19256 250 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 ACAT1P24752 427 aaKnown RBP22.87■■□□□ 1.25
NEK3-202ENST00000550841 NDST1P52848 882 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 UVSSAQ2YD98 709 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 SLC39A12Q504Y0 691 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 CCDC149Q6ZUS6 474 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 RRAGAQ7L523 313 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 CRYBG2Q8N1P7 616 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 KREMEN2Q8NCW0 462 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 PABPC5Q96DU9 382 aaKnown RBP22.87■■□□□ 1.25
NEK3-202ENST00000550841 PCMTD1Q96MG8 357 aaPredicted RBP22.87■■□□□ 1.25
NEK3-202ENST00000550841 ERGIC2Q96RQ1 377 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 UHRF1Q96T88 793 aaPredicted RBP22.87■■□□□ 1.25
NEK3-202ENST00000550841 PLCB1Q9NQ66 1216 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 DZANK1Q9NVP4 752 aa22.87■■□□□ 1.25
NEK3-202ENST00000550841 VCANP13611 3396 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 A0A1B0GTH6 734 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 CILPO75339 1184 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 RFX1P22670 979 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 GTF2F1P35269 517 aaKnown RBP eCLIP22.86■■□□□ 1.25
NEK3-202ENST00000550841 KCNC3Q14003 757 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 CTC1Q2NKJ3 1217 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 LLGL2Q6P1M3 1020 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 FAM171BQ6P995 826 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 C4orf50Q6ZRC1 276 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 ARHGEF19Q8IW93 802 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 SPPL2BQ8TCT7 592 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 TMEM209Q96SK2 561 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 LSM14BQ9BX40 385 aaKnown RBP22.86■■□□□ 1.25
NEK3-202ENST00000550841 HSFX1Q9UBD0 423 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 PCDHB5Q9Y5E4 795 aa22.86■■□□□ 1.25
NEK3-202ENST00000550841 TSC2P49815 1807 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 SPDYE4A6NLX3 237 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 OR4Q2P0C623 313 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 EPCAMP16422 314 aa22.85■■□□□ 1.25
NEK3-202ENST00000550841 HOXB8P17481 243 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms