RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 SPATA18Q8TC71 538 aa18.4■□□□□ 0.54
BRF1-217ENST00000550375 PGLYRP2Q96PD5 576 aa18.4■□□□□ 0.54
BRF1-217ENST00000550375 OXCT2Q9BYC2 517 aaPredicted RBP18.4■□□□□ 0.54
BRF1-217ENST00000550375 ZCWPW1Q9H0M4 648 aa18.4■□□□□ 0.54
BRF1-217ENST00000550375 GTPBP10A4D1E9 387 aaKnown RBP18.39■□□□□ 0.53
BRF1-217ENST00000550375 ATP2C2O75185 946 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 GLP2RO95838 553 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 FAM163BP0C2L3 166 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 PON1P27169 355 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 PCSK1P29120 753 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
BRF1-217ENST00000550375 ORC1Q13415 861 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 ADAM15Q13444 863 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 CUL2Q13617 745 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 SLC39A12Q504Y0 691 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 FKBP15Q5T1M5 1219 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 TRIM65Q6PJ69 517 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 RNF19BQ6ZMZ0 732 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 LRRTM3Q86VH5 581 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 SYT15Q9BQS2 421 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 ACBD6Q9BR61 282 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 CYP3A43Q9HB55 503 aa18.39■□□□□ 0.53
BRF1-217ENST00000550375 REV3LO60673 3130 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 LRRC10BA6NIK2 292 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 NCK2O43639 380 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 NDST1P52848 882 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 UBXN1Q04323 297 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 KCNMA1Q12791 1236 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 KCNC3Q14003 757 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 INTS6LQ5JSJ4 861 aaKnown RBP18.38■□□□□ 0.53
BRF1-217ENST00000550375 PHLDB3Q6NSJ2 640 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 GJB7Q6PEY0 223 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 LILRA6Q6PI73 481 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 DCP1BQ8IZD4 617 aaKnown RBP18.38■□□□□ 0.53
BRF1-217ENST00000550375 KREMEN2Q8NCW0 462 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 ZNF461Q8TAF7 563 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 KAT5Q92993 513 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
BRF1-217ENST00000550375 LPIN3Q9BQK8 851 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 DPEP3Q9H4B8 488 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 CDH9Q9ULB4 789 aa18.38■□□□□ 0.53
BRF1-217ENST00000550375 BARX2Q9UMQ3 279 aaPredicted RBP18.38■□□□□ 0.53
BRF1-217ENST00000550375 FSD2A1L4K1 749 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 LGALS16A8MUM7 142 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 ABLIM3O94929 683 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 SERPINC1P01008 464 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 DLX2Q07687 328 aaPredicted RBP18.37■□□□□ 0.53
BRF1-217ENST00000550375 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 GPR17Q13304 367 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 CASP10Q92851 521 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 LSM14BQ9BX40 385 aaKnown RBP18.37■□□□□ 0.53
BRF1-217ENST00000550375 UBE2TQ9NPD8 197 aaPredicted RBP18.37■□□□□ 0.53
BRF1-217ENST00000550375 CRTAC1Q9NQ79 661 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 CISHQ9NSE2 258 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 TMLHEQ9NVH6 421 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 FBXW11Q9UKB1 542 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 GTF3C4Q9UKN8 822 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 EYSQ5T1H1 3165 aa18.37■□□□□ 0.53
BRF1-217ENST00000550375 MYBPHLA2RUH7 354 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 TBX10O75333 385 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 SEC24AO95486 1093 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 SRGAP2BP0DMP2 458 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 TBXAS1P24557 533 aaPredicted RBP18.36■□□□□ 0.53
BRF1-217ENST00000550375 ELF1P32519 619 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 KLK7P49862 253 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 FANCCQ00597 558 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 CTC1Q2NKJ3 1217 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 FILIP1LQ4L180 1135 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 ZNF394Q53GI3 561 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 MDH1BQ5I0G3 518 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 TPGS2Q68CL5 300 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 ACOT1Q86TX2 421 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 ATAD1Q8NBU5 361 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 FAXDC2Q96IV6 333 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 PCMTD1Q96MG8 357 aaPredicted RBP18.36■□□□□ 0.53
BRF1-217ENST00000550375 TWNKQ96RR1 684 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 APOL5Q9BWW9 433 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 CYP4F11Q9HBI6 524 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 SIX2Q9NPC8 291 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 AFF4Q9UHB7 1163 aaKnown RBP18.36■□□□□ 0.53
BRF1-217ENST00000550375 CUL9Q8IWT3 2517 aa18.36■□□□□ 0.53
BRF1-217ENST00000550375 MTMR11A4FU01 709 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 PRRG1O14668 218 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 TEX33O43247 280 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 CILPO75339 1184 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 VNN2O95498 520 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 ATF2P15336 505 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 PTPN1P18031 435 aaKnown RBP18.35■□□□□ 0.53
BRF1-217ENST00000550375 LTBRP36941 435 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 INCA1Q0VD86 236 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 COL19A1Q14993 1142 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 SYCP1Q15431 976 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 PTPN21Q16825 1174 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 LIN9Q5TKA1 542 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 ANKRD54Q6NXT1 300 aa18.35■□□□□ 0.53
BRF1-217ENST00000550375 UNC93AQ86WB7 457 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms