RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CES5AQ6NT32 575 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 SCARA5Q6ZMJ2 495 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 GPR149Q86SP6 731 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 TCEAL8Q8IYN2 117 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 ATAD1Q8NBU5 361 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 CMASQ8NFW8 434 aaPredicted RBP24.12■■□□□ 1.45
BRF1-216ENST00000550208 OR6B3Q8NGW1 331 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 ENOX1Q8TC92 643 aaKnown RBP24.12■■□□□ 1.45
BRF1-216ENST00000550208 SUSD6Q92537 303 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 ZNF707Q96C28 371 aaPredicted RBP24.12■■□□□ 1.45
BRF1-216ENST00000550208 SNX25Q9H3E2 840 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 TMLHEQ9NVH6 421 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 COQ4Q9Y3A0 265 aa24.12■■□□□ 1.45
BRF1-216ENST00000550208 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.12■■□□□ 1.45
BRF1-216ENST00000550208 PRRG1O14668 218 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 ATP2C2O75185 946 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 TSPY1Q01534 308 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 SKOR2Q2VWA4 1001 aaPredicted RBP24.11■■□□□ 1.45
BRF1-216ENST00000550208 HSP90AA4PQ58FG1 418 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 CCDC149Q6ZUS6 474 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 DCP1BQ8IZD4 617 aaKnown RBP24.11■■□□□ 1.45
BRF1-216ENST00000550208 TATDN2Q93075 761 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 PRKD2Q9BZL6 878 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 DNAJC25Q9H1X3 360 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 CRISPLD1Q9H336 500 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 SAMSN1Q9NSI8 373 aaKnown RBP24.11■■□□□ 1.45
BRF1-216ENST00000550208 ZDHHC7Q9NXF8 308 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 MAFFQ9ULX9 164 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 SLC27A5Q9Y2P5 690 aa24.11■■□□□ 1.45
BRF1-216ENST00000550208 TCF20Q9UGU0 1960 aaKnown RBP24.11■■□□□ 1.45
BRF1-216ENST00000550208 MTMR11A4FU01 709 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 P4HA1P13674 534 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 NOP14P78316 857 aaKnown RBP24.1■■□□□ 1.45
BRF1-216ENST00000550208 DUSP4Q13115 394 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 SMAD2Q15796 467 aaKnown RBP24.1■■□□□ 1.45
BRF1-216ENST00000550208 INTS6LQ5JSJ4 861 aaKnown RBP24.1■■□□□ 1.45
BRF1-216ENST00000550208 TJAP1Q5JTD0 557 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 ATAT1Q5SQI0 421 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 CCDC150Q8NCX0 1101 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 IMPG2Q9BZV3 1241 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 GTF3C4Q9UKN8 822 aa24.1■■□□□ 1.45
BRF1-216ENST00000550208 MYBPHLA2RUH7 354 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 PMM2O15305 246 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 CCL16O15467 120 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 LETM1O95202 739 aaPredicted RBP24.09■■□□□ 1.45
BRF1-216ENST00000550208 PAPLNO95428 1278 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 AFPP02771 609 aaKnown RBP24.09■■□□□ 1.45
BRF1-216ENST00000550208 HNRNPA1P09651 372 aaKnown RBP eCLIP24.09■■□□□ 1.45
BRF1-216ENST00000550208 PCSK1P29120 753 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 ASPAP45381 313 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 MTIF2P46199 727 aaKnown RBP24.09■■□□□ 1.45
BRF1-216ENST00000550208 NFKBIBQ15653 356 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 CCDC142Q17RM4 750 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 RTL10Q7L3V2 364 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 SMG7Q92540 1137 aaKnown RBP24.09■■□□□ 1.45
BRF1-216ENST00000550208 PKMYT1Q99640 499 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 LPIN3Q9BQK8 851 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 CDH9Q9ULB4 789 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 FAM50BQ9Y247 325 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 NFE2L3Q9Y4A8 694 aa24.09■■□□□ 1.45
BRF1-216ENST00000550208 MTHFRP42898 656 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 PSMC1P62191 440 aaKnown RBP24.08■■□□□ 1.45
BRF1-216ENST00000550208 WDR44Q5JSH3 913 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 FAM171BQ6P995 826 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 TTC9BQ8N6N2 239 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 RIPOR3Q96MK2 946 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 SYT15Q9BQS2 421 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 BCO2Q9BYV7 579 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 PIDD1Q9HB75 910 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 CRTAC1Q9NQ79 661 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 MAGEC2Q9UBF1 373 aaPredicted RBP24.08■■□□□ 1.45
BRF1-216ENST00000550208 INSL5Q9Y5Q6 135 aa24.08■■□□□ 1.45
BRF1-216ENST00000550208 SYCE3A1L190 88 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 A8MXQ7 604 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 N4BP1O75113 896 aaKnown RBP24.07■■□□□ 1.44
BRF1-216ENST00000550208 HOXA9P31269 272 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 LRMPQ12912 555 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 CBX2Q14781 532 aaPredicted RBP24.07■■□□□ 1.44
BRF1-216ENST00000550208 ANO6Q4KMQ2 910 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 CYP26C1Q6V0L0 522 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 FAM114A1Q8IWE2 563 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 FUCA2Q9BTY2 467 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 NIF3L1Q9GZT8 377 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 DPEP3Q9H4B8 488 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 POMKQ9H5K3 350 aa24.07■■□□□ 1.44
BRF1-216ENST00000550208 SPTBN5Q9NRC6 3674 aaKnown RBP24.07■■□□□ 1.44
BRF1-216ENST00000550208 P4HA2O15460 535 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 PTPN1P18031 435 aaKnown RBP24.06■■□□□ 1.44
BRF1-216ENST00000550208 TWF1Q12792 350 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 SMARCB1Q12824 385 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 NFE2Q16621 373 aaPredicted RBP24.06■■□□□ 1.44
BRF1-216ENST00000550208 EHBP1Q8NDI1 1231 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 LMO3Q8TAP4 145 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 RHOBTB2Q9BYZ6 727 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 CYP3A43Q9HB55 503 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 FANCLQ9NW38 375 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 ABI2Q9NYB9 513 aaPredicted RBP24.06■■□□□ 1.44
BRF1-216ENST00000550208 PCDHB5Q9Y5E4 795 aa24.06■■□□□ 1.44
BRF1-216ENST00000550208 KCNJ18B7U540 433 aa24.05■■□□□ 1.44
BRF1-216ENST00000550208 SOAT2O75908 522 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms