RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 PDP2Q9P2J9 529 aa13.46□□□□□ -0.25
CALCOCO1-217ENST00000549935 TCEAL9Q9UHQ7 104 aa13.46□□□□□ -0.25
CALCOCO1-217ENST00000549935 TBX20Q9UMR3 447 aa13.46□□□□□ -0.25
CALCOCO1-217ENST00000549935 MTO1Q9Y2Z2 717 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-217ENST00000549935 UBIAD1Q9Y5Z9 338 aa13.46□□□□□ -0.25
CALCOCO1-217ENST00000549935 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.25
CALCOCO1-217ENST00000549935 MAP3K13O43283 966 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 AP1G2O75843 785 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 UPP2O95045 317 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 TJP3O95049 919 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 PSMG1O95456 288 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 CETN2P41208 172 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 KPNB1Q14974 876 aaKnown RBP13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 RCN1Q15293 331 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 MAPK6Q16659 721 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 MON1BQ7L1V2 547 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 NIPA1Q7RTP0 329 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 GSTA5Q7RTV2 222 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 ALLCQ8N6M5 410 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 UCMAQ8WVF2 138 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 SKA1Q96BD8 255 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 FBXL18Q96ME1 805 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 NR1H4Q96RI1 486 aaPredicted RBP13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 DEFB129Q9H1M3 183 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 NPHS2Q9NP85 383 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.46□□□□□ -0.26
CALCOCO1-217ENST00000549935 A0A1W2PPM1 405 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 EIF4E1BA6NMX2 242 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 ATP2A1O14983 1001 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 ATP9AO75110 1047 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 LYPLA2O95372 231 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 MYCLP12524 364 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 KRT5P13647 590 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 NPTX2P47972 431 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 BPIFB4P59827 614 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 RCN2Q14257 317 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 RNASEH2BQ5TBB1 312 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 PPP1R2P3Q6NXS1 205 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 RSBN1LQ6PCB5 846 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 CENPUQ71F23 418 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 USP37Q86T82 979 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 RCOR2Q8IZ40 523 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 PPFIBP2Q8ND30 876 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TMEM161BQ8NDZ6 487 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 FAM84AQ96KN4 292 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 PI4K2AQ9BTU6 479 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TRIM55Q9BYV6 548 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 PIDD1Q9HB75 910 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 F8W8V4 182 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 GYG2O15488 501 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TBX10O75333 385 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 KRT4P19013 534 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 RAP1GDS1P52306 607 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 SOX10P56693 466 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TAS2R40P59535 323 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 DMP1Q13316 513 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TRIM72Q6ZMU5 477 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 SYTL5Q8TDW5 730 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 MZB1Q8WU39 189 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TAAR1Q96RJ0 339 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 TBC1D22BQ9NU19 505 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 POLIQ9UNA4 740 aa13.45□□□□□ -0.26
CALCOCO1-217ENST00000549935 CAPN9O14815 690 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 APBA3O96018 575 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 CCNE2O96020 404 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 TSHRP16473 764 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 HMGB2P26583 209 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 PTPN7P35236 360 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 NSFP46459 744 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 PSMC5P62195 406 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 CDK16Q00536 496 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 MCL1Q07820 350 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 NFX1Q12986 1120 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 DYNC1I2Q13409 638 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 DGKZQ13574 1117 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 FASTKD3Q14CZ7 662 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 LIN9Q5TKA1 542 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 CHSY1Q86X52 802 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 MAP4K3Q8IVH8 894 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 ARHGAP24Q8N264 748 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 ARHGAP18Q8N392 663 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 BANPQ8N9N5 519 aa13.44□□□□□ -0.26
CALCOCO1-217ENST00000549935 FLAD1Q8NFF5 587 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms