RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 SPACA3Q8IXA5 215 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 HMGB4Q8WW32 186 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 TCP11Q8WWU5 503 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 TEKT3Q9BXF9 490 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 TASP1Q9H6P5 420 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 AFF4Q9UHB7 1163 aaKnown RBP9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 V9GY48 417 aaPredicted RBP9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 TRIP11Q15643 1979 aa9.1□□□□□ -0.95
SMARCD1-207ENST00000549526 A0A1B0GUA9 196 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 TBX3O15119 743 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 MSH4O15457 936 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 MYF5P13349 255 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 CPB1P15086 417 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 GNSP15586 552 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 WEE1P30291 646 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 PTENP60484 403 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 FUT2Q10981 343 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 GRIK2Q13002 908 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 PLD1Q13393 1074 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 UPP1Q16831 310 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 BROXQ5VW32 411 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 CD300LGQ6UXG3 332 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 SLC36A4Q6YBV0 504 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 DNAJB7Q7Z6W7 309 aaPredicted RBP9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 TMPRSS12Q86WS5 348 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 CPA6Q8N4T0 437 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 CRYGNQ8WXF5 182 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 GJA10Q969M2 543 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 TMEM176AQ96HP8 235 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 CEP170P1Q96L14 293 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 RIT2Q99578 217 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 ZDHHC5Q9C0B5 715 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 GLT8D2Q9H1C3 349 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 FAM124BQ9H5Z6 455 aaPredicted RBP9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 CPNE5Q9HCH3 593 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 TM7SF3Q9NS93 570 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 YIPF1Q9Y548 306 aa9.09□□□□□ -0.95
SMARCD1-207ENST00000549526 AHCTF1Q8WYP5 2266 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 MYLKQ15746 1914 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 ANTXRLA6NF34 631 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 K7EQS6 105 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 TNFSF14O43557 240 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 EIF5BO60841 1220 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 HNRNPLP14866 589 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 HNF1BP35680 557 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 TMPRSS3P57727 454 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 CCT2P78371 535 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 CYP4F8P98187 520 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 AKAP17AQ02040 695 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 MBTD1Q05BQ5 628 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 BFSP1Q12934 665 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 MYO1EQ12965 1108 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 NFATC3Q12968 1075 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 TOB2Q14106 344 aaPredicted RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 TFDP1Q14186 410 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 MXD4Q14582 209 aaPredicted RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 PDGFRLQ15198 375 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 AMHR2Q16671 573 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 C6orf132Q5T0Z8 1188 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 PPP1R18Q6NYC8 613 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 FBXL16Q8N461 479 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 TRIML1Q8N9V2 468 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 C3orf58Q8NDZ4 430 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 RDM1Q8NG50 284 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 HSPA12BQ96MM6 686 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 UROC1Q96N76 676 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 LGMNQ99538 433 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 LARP6Q9BRS8 491 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 SLC46A2Q9BY10 475 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 AGXT2Q9BYV1 514 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 TM6SF1Q9BZW5 370 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 DNAJC25Q9H1X3 360 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 DHX33Q9H6R0 707 aaKnown RBP9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 GAREM1Q9H706 876 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 ECT2Q9H8V3 914 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 IL21RQ9HBE5 538 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 SUSD2Q9UGT4 822 aa9.08□□□□□ -0.96
SMARCD1-207ENST00000549526 hCG_1984214I3L0E3 225 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 SYN3O14994 580 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 FLRT2O43155 660 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 MARCH6O60337 910 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 CILPO75339 1184 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 RECQL4O94761 1208 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 PDIA3P30101 505 aaKnown RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 AVPR1AP37288 418 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 RFC5P40937 340 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 PSMC5P62195 406 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 DUSP4Q13115 394 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 STK3Q13188 491 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 MRPL58Q14197 206 aaKnown RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 PFKFB3Q16875 520 aaPredicted RBP9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 GLRA4Q5JXX5 417 aa9.07□□□□□ -0.96
SMARCD1-207ENST00000549526 SYCP2LQ5T4T6 812 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms