RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 FGF14Q92915 247 aa25.06■■□□□ 1.6
SMARCC2-204ENST00000547356 GSDMAQ96QA5 445 aa25.06■■□□□ 1.6
SMARCC2-204ENST00000547356 MMS19Q96T76 1030 aa25.06■■□□□ 1.6
SMARCC2-204ENST00000547356 AVENQ9NQS1 362 aaPredicted RBP25.06■■□□□ 1.6
SMARCC2-204ENST00000547356 RMND1Q9NWS8 449 aa25.06■■□□□ 1.6
SMARCC2-204ENST00000547356 FRMD4BQ9Y2L6 1034 aa25.06■■□□□ 1.6
SMARCC2-204ENST00000547356 GABRDO14764 452 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 KINO60870 393 aaKnown RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 ATP2C2O75185 946 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 MOSPD3O75425 235 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 SMC2O95347 1197 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 VNN1O95497 513 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 C4BPAP04003 597 aaKnown RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 ATF6P18850 670 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 LMO2P25791 158 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 ALDH1A3P47895 512 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 GPR15P49685 360 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 CLDN10P78369 228 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 TSPY1Q01534 308 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 TRPC3Q13507 836 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 INTS6LQ5JSJ4 861 aaKnown RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 ZNF658Q5TYW1 1059 aaPredicted RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 PDZD4Q76G19 769 aaPredicted RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 DCP1BQ8IZD4 617 aaKnown RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 SLC44A3Q8N4M1 653 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 STKLD1Q8NE28 680 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 PKMYT1Q99640 499 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 MRPL45Q9BRJ2 306 aaKnown RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 PI4K2AQ9BTU6 479 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 LRRC3Q9BY71 257 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 XYLT2Q9H1B5 865 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 ZNF334Q9HCZ1 680 aaPredicted RBP25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 NME7Q9Y5B8 376 aa25.05■■□□□ 1.6
SMARCC2-204ENST00000547356 TRIM49P0CI25 452 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 TRIM49CP0CI26 452 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 EPHB3P54753 998 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 PSMC1P62191 440 aaKnown RBP25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 MYL7Q01449 175 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 PLD1Q13393 1074 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 NFIL3Q16649 462 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 TMC8Q8IU68 726 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 GPR152Q8TDT2 470 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 GIPC2Q8TF65 315 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 PBXIP1Q96AQ6 731 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 ACBD6Q9BR61 282 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 ASAH2Q9NR71 780 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 NXF1Q9UBU9 619 aaKnown RBP25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 MAN1B1Q9UKM7 699 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 GTF3C4Q9UKN8 822 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 DUSP12Q9UNI6 340 aa25.04■■□□□ 1.6
SMARCC2-204ENST00000547356 MYBPHLA2RUH7 354 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 HAPLN1P10915 354 aaPredicted RBP25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 PMS1P54277 932 aaKnown RBP25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 ADAM9Q13443 819 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 WDR72Q3MJ13 1102 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 CYP4A22Q5TCH4 519 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 SDHAF4Q5VUM1 108 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 FAM186BQ8IYM0 893 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 SHKBP1Q8TBC3 707 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 TMC2Q8TDI7 906 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 KXD1Q9BQD3 176 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 PCDHB5Q9Y5E4 795 aa25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 ZFP37Q9Y6Q3 630 aaPredicted RBP25.03■■□□□ 1.6
SMARCC2-204ENST00000547356 CLSTN1O94985 981 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 PDGFRBP09619 1106 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 WARSP23381 471 aaKnown RBP25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 LHX1P48742 406 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 VAMP7P51809 220 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 EPHA5P54756 1037 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 TNNC1P63316 161 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 NCOA4Q13772 614 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 TEAD2Q15562 447 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 DPH6Q7L8W6 267 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 DNAJB7Q7Z6W7 309 aaPredicted RBP25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 FAM200AQ8TCP9 573 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 SPPL2BQ8TCT7 592 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 ZSWIM3Q96MP5 696 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 SYT15Q9BQS2 421 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 SMYD3Q9H7B4 428 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.02■■□□□ 1.64e-11■■■■■ 75.3
SMARCC2-204ENST00000547356 HOOK1Q9UJC3 728 aaKnown RBP25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 TRIOO75962 3097 aa25.02■■□□□ 1.6
SMARCC2-204ENST00000547356 TRIM49BA6NDI0 452 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 CFHP08603 1231 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 CYP2F1P24903 491 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 RAP1GAPP47736 663 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 TUFMP49411 452 aaKnown RBP25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 ZNF699Q32M78 642 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 SCARA5Q6ZMJ2 495 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 SV2AQ7L0J3 742 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 SPATA18Q8TC71 538 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 C2orf15Q8WU43 125 aaKnown RBP25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 MMRN2Q9H8L6 949 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 CRTAC1Q9NQ79 661 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 HSFX1Q9UBD0 423 aa25.01■■□□□ 1.59
SMARCC2-204ENST00000547356 A0A1W2PRU2 124 aa25■■□□□ 1.59
SMARCC2-204ENST00000547356 BIN1O00499 593 aa25■■□□□ 1.59
SMARCC2-204ENST00000547356 ZNF197O14709 1029 aa25■■□□□ 1.59
SMARCC2-204ENST00000547356 STAU1O95793 577 aaKnown RBP25■■□□□ 1.59
SMARCC2-204ENST00000547356 CD44P16070 742 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms