RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 MYL7Q01449 175 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 BIRC3Q13489 604 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 C1orf220Q5T0J3 134 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 LILRA6Q6PI73 481 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 MTSS1LQ765P7 747 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 TAS1R1Q7RTX1 841 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 OR5B17Q8NGF7 314 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 RIN2Q8WYP3 895 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-226ENST00000547259 FAM84AQ96KN4 292 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 ZMAT2Q96NC0 199 aaKnown RBP12.98□□□□□ -0.33
HDAC7-226ENST00000547259 PPP1R10Q96QC0 940 aaKnown RBP12.98□□□□□ -0.33
HDAC7-226ENST00000547259 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 MTMR12Q9C0I1 747 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 VPS16Q9H269 839 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 SLC2A4RGQ9NR83 387 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 SLC38A7Q9NVC3 462 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 MIOSQ9NXC5 875 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 SIT1Q9Y3P8 196 aa12.98□□□□□ -0.33
HDAC7-226ENST00000547259 N4BP1O75113 896 aaKnown RBP12.97□□□□□ -0.33
HDAC7-226ENST00000547259 PHACTR2O75167 634 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 XYLBO75191 536 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 ZMYND10O75800 440 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 LMNAP02545 664 aaKnown RBP12.97□□□□□ -0.33
HDAC7-226ENST00000547259 HOXA9P31269 272 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 GTF2H1P32780 548 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 FMO5P49326 533 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 CLDN10P78369 228 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 FANCCQ00597 558 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 KCNH2Q12809 1159 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 TUSC3Q13454 348 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 UVSSAQ2YD98 709 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 VWA3BQ502W6 1294 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 C18orf25Q96B23 403 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-226ENST00000547259 ZNF707Q96C28 371 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-226ENST00000547259 MYADMQ96S97 322 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 TTPALQ9BTX7 342 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 GPR62Q9BZJ7 368 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 NDST4Q9H3R1 872 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 TBC1D17Q9HA65 648 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 TMEM8AQ9HCN3 771 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 DPP3Q9NY33 737 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 TUBGCP4Q9UGJ1 667 aa12.97□□□□□ -0.33
HDAC7-226ENST00000547259 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-226ENST00000547259 FANCMQ8IYD8 2048 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 OTOGLQ3ZCN5 2332 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 MIA3Q5JRA6 1907 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 CEP250Q9BV73 2442 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 NARSO43776 548 aaKnown RBP12.96□□□□□ -0.33
HDAC7-226ENST00000547259 CLSTN1O94985 981 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 ITGB3P05106 788 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 KRT19P08727 400 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 SPATA31D3P0C874 917 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 FSHRP23945 695 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 PIK3CAP42336 1068 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 GUCY2FP51841 1108 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 MCCD1P59942 119 aaPredicted RBP12.96□□□□□ -0.33
HDAC7-226ENST00000547259 PFKPQ01813 784 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 ZBTB6Q15916 424 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 MIIPQ5JXC2 388 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 FKBP15Q5T1M5 1219 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.33
HDAC7-226ENST00000547259 KRT39Q6A163 491 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 DCLRE1AQ6PJP8 1040 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 SPATA31D4Q6ZUB0 917 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 GET4Q7L5D6 327 aaPredicted RBP12.96□□□□□ -0.33
HDAC7-226ENST00000547259 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 ZNF516Q92618 1163 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 ARHGEF3Q9NR81 526 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 ITGA11Q9UKX5 1188 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 CA14Q9ULX7 337 aa12.96□□□□□ -0.33
HDAC7-226ENST00000547259 R3HCC1Q9Y3T6 440 aaKnown RBP12.96□□□□□ -0.33
HDAC7-226ENST00000547259 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 LGALS16A8MUM7 142 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 TRAPPC3O43617 180 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 POU2F2P09086 479 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 CYP3A5P20815 502 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 POLR2BP30876 1174 aaKnown RBP12.95□□□□□ -0.34
HDAC7-226ENST00000547259 MAGEA9P43362 315 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 SOX4Q06945 474 aaPredicted RBP12.95□□□□□ -0.34
HDAC7-226ENST00000547259 CETN1Q12798 172 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 TRPC3Q13507 836 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 HTR4Q13639 388 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 NAB2Q15742 525 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 ZACNQ401N2 412 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 CBWD6Q4V339 395 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 CBWD3Q5JTY5 395 aa12.95□□□□□ -0.34
HDAC7-226ENST00000547259 CBWD5Q5RIA9 395 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms