RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CCZ1BP86790 482 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 CCZ1P86791 482 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 TSPY1Q01534 308 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 ANKS3Q6ZW76 656 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 DDX53Q86TM3 631 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 GPR65Q8IYL9 337 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 ZNF606Q8WXB4 792 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 CHP1Q99653 195 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 TTPALQ9BTX7 342 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 GPR62Q9BZJ7 368 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 ELOVL4Q9GZR5 314 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 LUC7LQ9NQ29 371 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 NOCTQ9UK39 431 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 TIMM13Q9Y5L4 95 aaPredicted RBP16.85■□□□□ 0.29
TRAFD1-203ENST00000547063 TSC2P49815 1807 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 CEP290O15078 2479 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 CAPN15O75808 1086 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 EFEMP2O95967 443 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 SOD2P04179 222 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 TKTP29401 623 aaKnown RBP16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 BMPR1AP36894 532 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 PLCB3Q01970 1234 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 SPA17Q15506 151 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 RAB30Q15771 203 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 KIAA1841Q6NSI8 718 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 ZNF571Q7Z3V5 609 aaPredicted RBP16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 ACOT1Q86TX2 421 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 NOP9Q86U38 636 aaKnown RBP16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 CEP57Q86XR8 500 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 TXLNBQ8N3L3 684 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 B3GALNT2Q8NCR0 500 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 HMGXB4Q9UGU5 601 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 PCDHGC3Q9UN70 934 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 SSX2IPQ9Y2D8 614 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 CEP83Q9Y592 693 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 EPN1Q9Y6I3 576 aaPredicted RBP16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
TRAFD1-203ENST00000547063 MKI67P46013 3256 aaKnown RBP16.83■□□□□ 0.29
TRAFD1-203ENST00000547063 LINC01553A4QN01 128 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 SOWAHDA6NJG2 315 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 OR6C75A6NL08 312 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 RB1P06400 928 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 PLEKP08567 350 aaPredicted RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 PTPN1P18031 435 aaKnown RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 LMO2P25791 158 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 KIF11P52732 1056 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 KRT83P78385 493 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 CNGA2Q16280 664 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 SLC18A3Q16572 532 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 VARS2Q5ST30 1063 aaKnown RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 C10orf76Q5T2E6 689 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 ARHGAP17Q68EM7 881 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 TMEM173Q86WV6 379 aaPredicted RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 DCP1BQ8IZD4 617 aaKnown RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 TWNKQ96RR1 684 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 SYT11Q9BT88 431 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 HERC2P3Q9BVR0 1158 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 KCNF1Q9H3M0 494 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 SEPT11Q9NVA2 429 aaKnown RBP16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 HESX1Q9UBX0 185 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 ADAMTS1Q9UHI8 967 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 MSRAQ9UJ68 235 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
TRAFD1-203ENST00000547063 ATP8B3O60423 1300 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 EIF3CLB5ME19 914 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 FGF18O76093 207 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 NDUFA10O95299 355 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 LSM8O95777 96 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 URODP06132 367 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 GZMAP12544 262 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 BRD2P25440 801 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 CTNNB1P35222 781 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 GLUD2P49448 558 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 RABGGTBP53611 331 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 CREMQ03060 361 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 SMARCB1Q12824 385 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 MRPL58Q14197 206 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 ASTE1Q2TB18 679 aaPredicted RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 CTXN3Q4LDR2 81 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 TAF3Q5VWG9 929 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 GPIHBP1Q8IV16 184 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 GLYCTKQ8IVS8 523 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 TDHQ8IZJ6 230 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 BCL7CQ8WUZ0 217 aaPredicted RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 PIK3R5Q8WYR1 880 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 ZNF830Q96NB3 372 aaPredicted RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 EIF3CQ99613 913 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 ZNF518BQ9C0D4 1074 aa16.82■□□□□ 0.28
TRAFD1-203ENST00000547063 CHST7Q9NS84 486 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms