RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 PROSER3Q2NL68 480 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 SLC30A10Q6XR72 485 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 FAM90A1Q86YD7 464 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 FAM9AQ8IZU1 332 aaPredicted RBP5.46□□□□□ -1.54
CCDC38-204ENST00000546816 PRR18Q8N4B5 295 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 AOPEPQ8N6M6 819 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 SCAMP4Q969E2 229 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 BHMT2Q9H2M3 363 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 PCDH12Q9NPG4 1184 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 MAN1C1Q9NR34 630 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 SERTAD4Q9NUC0 356 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 ETAA1Q9NY74 926 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 AGAP1Q9UPQ3 857 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 ZNF521Q96K83 1311 aa5.46□□□□□ -1.54
CCDC38-204ENST00000546816 A0A0B4J269 797 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 GJB1P08034 283 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 PDCP20941 246 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 CCND1P24385 295 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 CERS1P27544 350 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 PCSK6P29122 969 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 PRDX5P30044 214 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 PSMC1P62191 440 aaKnown RBP5.45□□□□□ -1.54
CCDC38-204ENST00000546816 TUBB3Q13509 450 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.45□□□□□ -1.54
CCDC38-204ENST00000546816 MIER2Q8N344 545 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 C3orf20Q8ND61 904 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 WASF1Q92558 559 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 OSBPL9Q96SU4 736 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 SMAD5Q99717 465 aaKnown RBP5.45□□□□□ -1.54
CCDC38-204ENST00000546816 SMOQ99835 787 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 KRTAP2-2Q9BYT5 123 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 BRD9Q9H8M2 597 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 GPR35Q9HC97 309 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 RLIMQ9NVW2 624 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 EHD3Q9NZN3 535 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 DKK3Q9UBP4 350 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 PCDHA3Q9Y5H8 950 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 COL4A3BPQ9Y5P4 624 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 NR2E3Q9Y5X4 410 aa5.45□□□□□ -1.54
CCDC38-204ENST00000546816 ZNF785A8K8V0 405 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 POLRMTO00411 1230 aaKnown RBP5.44□□□□□ -1.54
CCDC38-204ENST00000546816 RECQLP46063 649 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-204ENST00000546816 HABP2Q14520 560 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-204ENST00000546816 YTHDF3Q7Z739 585 aaKnown RBP5.44□□□□□ -1.54
CCDC38-204ENST00000546816 REPS1Q96D71 796 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 BRIP1Q9BX63 1249 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 AMBRA1Q9C0C7 1298 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 SMOC2Q9H3U7 446 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 NRIP3Q9NQ35 241 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 POLHQ9Y253 713 aa5.44□□□□□ -1.54
CCDC38-204ENST00000546816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.44□□□□□ -1.54
CCDC38-204ENST00000546816 F5H697 171 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 EBLN1P0CF75 366 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 NHLRC4P0CG21 123 aaPredicted RBP5.43□□□□□ -1.54
CCDC38-204ENST00000546816 JUPP14923 745 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 ZFXP17010 805 aaPredicted RBP5.43□□□□□ -1.54
CCDC38-204ENST00000546816 SMARCA1P28370 1054 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 MPGP29372 298 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 PHKA1P46020 1223 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 TOB1P50616 345 aaPredicted RBP5.43□□□□□ -1.54
CCDC38-204ENST00000546816 HK3P52790 923 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 TCF15Q12870 199 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 KIF22Q14807 665 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 SLC9A4Q6AI14 798 aa5.43□□□□□ -1.54
CCDC38-204ENST00000546816 TISP43B9A030 160 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 SLC16A6O15403 523 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 TRIAP1O43715 76 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 GNAI3P08754 354 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 POU2F2P09086 479 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 FTH1P19P0C7X4 201 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 PIK3CGP48736 1102 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 NDUFV1P49821 464 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 ZNF135P52742 658 aaPredicted RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 GNAI1P63096 354 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 NOGQ13253 232 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 BMPR2Q13873 1038 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 BRDTQ58F21 947 aaPredicted RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 PLAC9Q5JTB6 97 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 TMEM240Q5SV17 173 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 KRTAP5-11Q6L8G4 156 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 TAF2Q6P1X5 1199 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 CEP85Q6P2H3 762 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 CRELD2Q6UXH1 353 aaPredicted RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 USP45Q70EL2 814 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 ZNF551Q7Z340 670 aaPredicted RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 PSD4Q8NDX1 1056 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 FKBP10Q96AY3 582 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 QTRT1Q9BXR0 403 aaKnown RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 MRPL46Q9H2W6 279 aaKnown RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 SLAMF7Q9NQ25 335 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 GNL3LQ9NVN8 582 aaKnown RBP5.42□□□□□ -1.54
CCDC38-204ENST00000546816 CFAP97Q9P2B7 532 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 ABCF2Q9UG63 623 aa5.42□□□□□ -1.54
CCDC38-204ENST00000546816 PPP6CO00743 305 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 ZNF213O14771 459 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 JTBO76095 146 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 SNUPNO95149 360 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms