RNA–Protein interactions for RNA: ENST00000546619.5

CALCOCO1-204, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-204ENST00000546619 THG1LQ9NWX6 298 aaKnown RBP16.44■□□□□ 0.22
CALCOCO1-204ENST00000546619 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
CALCOCO1-204ENST00000546619 C2CD2Q9Y426 696 aa16.44■□□□□ 0.22
CALCOCO1-204ENST00000546619 TSC2P49815 1807 aa16.44■□□□□ 0.22
CALCOCO1-204ENST00000546619 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 TISP43B9A030 160 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 LONP1P36776 959 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 MCM2P49736 904 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 TAF6P49848 677 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 CCINQ13939 588 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 ITPRIPL2Q3MIP1 535 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 C8orf34Q49A92 452 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 CEP68Q76N32 757 aa16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 ABI2Q9NYB9 513 aaPredicted RBP16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 AGO2Q9UKV8 859 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-204ENST00000546619 CHD8Q9HCK8 2581 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SLC30A4O14863 429 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 BMP15O95972 392 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 GRIN1Q05586 938 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SMARCB1Q12824 385 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 CSRP2Q16527 193 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 WSCD1Q658N2 575 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SLFN12LQ6IEE8 588 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 PRR23CQ6ZRP0 262 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SYNPOQ8N3V7 929 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SPPL2BQ8TCT7 592 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 C2orf15Q8WU43 125 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 LARP4BQ92615 738 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SLC46A2Q9BY10 475 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
CALCOCO1-204ENST00000546619 TULP1O00294 542 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 HAPLN1P10915 354 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 HOXA6P31267 233 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 HOXC13P31276 330 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 AVPR1AP37288 418 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 PTPAQ15257 358 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 SV2CQ496J9 727 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 LRRTM3Q86VH5 581 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 WDR5BQ86VZ2 330 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 DCP1BQ8IZD4 617 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 CMTM8Q8IZV2 173 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 FAM160A2Q8N612 972 aaPredicted RBP16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 KRI1Q8N9T8 703 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 IKZF4Q9H2S9 585 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 GKN1Q9NS71 199 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 ZMYM5Q9UJ78 669 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 STYXL1Q9Y6J8 313 aa16.41■□□□□ 0.22
CALCOCO1-204ENST00000546619 KPNA7A9QM74 516 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 EXTL3O43909 919 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 BFSP1Q12934 665 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 PPM1JQ5JR12 505 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 LARP1BQ659C4 914 aaKnown RBP16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 EFCAB13Q8IY85 973 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 MAB21L3Q8N8X9 362 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 PCDHB5Q9Y5E4 795 aa16.4■□□□□ 0.22
CALCOCO1-204ENST00000546619 KMT2BQ9UMN6 2715 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 GDF9O60383 454 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 FOXD2O60548 495 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 IL18RAPO95256 599 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 ADRB1P08588 477 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 DDIT3P35638 169 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 PXNP49023 591 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 NLRP12P59046 1061 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 TSPY1Q01534 308 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 POU5F1Q01860 360 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 GRSF1Q12849 480 aaKnown RBP eCLIP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 RUNX3Q13761 415 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 TRIM68Q6AZZ1 485 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 PKN3Q6P5Z2 889 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 CRELD2Q6UXH1 353 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 DYMQ7RTS9 669 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 BRAPQ7Z569 592 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 TMEM150AQ86TG1 271 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 SFR1Q86XK3 245 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 USP13Q92995 863 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 ZNF560Q96MR9 790 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 FAM83CQ9BQN1 747 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 HPS4Q9NQG7 708 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 TMLHEQ9NVH6 421 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 SCN1AP35498 2009 aa16.39■□□□□ 0.21
CALCOCO1-204ENST00000546619 ANK1P16157 1881 aa16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 F11P03951 625 aa16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 HMGA1P17096 107 aaKnown RBP16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 KCNA4P22459 653 aa16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 ADSSP30520 456 aa16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 PNPLA4P41247 253 aa16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 GPR15P49685 360 aa16.38■□□□□ 0.21
CALCOCO1-204ENST00000546619 POSTNQ15063 836 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms