RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 IL1RAPL1Q9NZN1 696 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 LZTS1Q9Y250 596 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 KANSL1LA0AUZ9 987 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SPECC1L-ADORA2AF8WAN1 911 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 NDUFB10O96000 172 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 GTF2H1P32780 548 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 TCP10Q12799 353 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 DNAJC3Q13217 504 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 DRAP1Q14919 205 aaPredicted RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 OTOP1Q7RTM1 612 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 FBXO11Q86XK2 927 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 LMO3Q8TAP4 145 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 RFFLQ8WZ73 363 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SPOCK2Q92563 424 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ALG3Q92685 438 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 GMCL1Q96IK5 515 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 ECSITQ9BQ95 431 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 CADM1Q9BY67 442 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 THAP2Q9H0W7 228 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 TBK1Q9UHD2 729 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 DNAJC12Q9UKB3 198 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 CARD8Q9Y2G2 431 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 HBS1LQ9Y450 684 aaKnown RBP8.29□□□□□ -1.08
UBR1-202ENST00000546274 NOX1Q9Y5S8 564 aa8.29□□□□□ -1.08
UBR1-202ENST00000546274 SMIM31A0A1B0GVY4 71 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 PIK3CDO00329 1044 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 VILLO15195 856 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 PTPN4P29074 926 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 PSMC2P35998 433 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 AUHQ13825 339 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 RRP1BQ14684 758 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 CCDC153Q494R4 210 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 DUPD1Q68J44 220 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 VPS36Q86VN1 386 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ARHGAP24Q8N264 748 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 FBXO25Q8TCJ0 367 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 GLG1Q92896 1179 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 STMN4Q9H169 189 aaPredicted RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 GPC6Q9Y625 555 aaPredicted RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 RASA4BC9J798 803 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 GYG2O15488 501 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 RASA4O43374 803 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 PSMD10O75832 226 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 GDF11O95390 407 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 FOSP01100 380 aaPredicted RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 TRIM49P0CI25 452 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 TRIM49CP0CI26 452 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 BRAFP15056 766 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 GAP43P17677 238 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 LMNB1P20700 586 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 TKTP29401 623 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 TSPY1Q01534 308 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 MPP2Q14168 576 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 KRT72Q14CN4 511 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 AADACL2Q6P093 401 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ZNF720Q7Z2F6 126 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 RASSF3Q86WH2 238 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 SCAIQ8N9R8 606 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 CXorf38Q8TB03 319 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 CKAP2Q8WWK9 683 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 MKNK1Q9BUB5 465 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 STRA6Q9BX79 667 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 SLCO1B3Q9NPD5 702 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 AASDHPPTQ9NRN7 309 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 STX18Q9P2W9 335 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 AMFRQ9UKV5 643 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 UMODL1Q5DID0 1318 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 BIRC5O15392 142 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 TIMM44O43615 452 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 EXOC3O60645 756 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 LRRN2O75325 713 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ABCB4P21439 1286 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 AMPD1P23109 780 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 S100A1P23297 94 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 MED21Q13503 144 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 MTFR1Q15390 333 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ZDHHC24Q6UX98 284 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 BTNL9Q6UXG8 535 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 PHLDB2Q86SQ0 1253 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ZBED8Q8IZ13 594 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ZDHHC14Q8IZN3 488 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 IDI2Q9BXS1 227 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 GRIP2Q9C0E4 1043 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 AGPAT3Q9NRZ7 376 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 KIAA1522Q9P206 1035 aaPredicted RBP8.28□□□□□ -1.08
UBR1-202ENST00000546274 DKK3Q9UBP4 350 aa8.28□□□□□ -1.08
UBR1-202ENST00000546274 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 CFAP69A5D8W1 941 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 NUDT17P0C025 328 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 FOXD4Q12950 439 aaPredicted RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 LPIN1Q14693 890 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 PUS10Q3MIT2 529 aaKnown RBP8.27□□□□□ -1.09
UBR1-202ENST00000546274 SPDYCQ5MJ68 293 aa8.27□□□□□ -1.09
UBR1-202ENST00000546274 MYCT1Q8N699 235 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms