RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 FNDC1Q4ZHG4 1894 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-224ENST00000545688 SOAT2O75908 522 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 GNAI2P04899 355 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 CDK4P11802 303 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 CD6P30203 668 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 GCLCP48506 637 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-224ENST00000545688 SOX10P56693 466 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 HNRNPA0Q13151 305 aaKnown RBP6.09□□□□□ -1.43
SNHG1-224ENST00000545688 PTPROQ16827 1216 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 PGS1Q32NB8 556 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 VPS53Q5VIR6 699 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 FAM109AQ8N4B1 249 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 CAMKK1Q8N5S9 505 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 FAM136AQ96C01 138 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 GPATCH3Q96I76 525 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 PNPOQ9NVS9 261 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 WNT6Q9Y6F9 365 aa6.09□□□□□ -1.43
SNHG1-224ENST00000545688 WIPF3A6NGB9 483 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 MANSC4A6NHS7 340 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-224ENST00000545688 GCOM1H8Y6P7 765 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-224ENST00000545688 TTLL1O95922 423 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 EXOSC10Q01780 885 aaKnown RBP6.08□□□□□ -1.44
SNHG1-224ENST00000545688 EXOSC9Q06265 439 aaKnown RBP6.08□□□□□ -1.44
SNHG1-224ENST00000545688 FAM153CQ494X1 144 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 FAM46DQ8NEK8 389 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 DDX17Q92841 729 aaKnown RBP6.08□□□□□ -1.44
SNHG1-224ENST00000545688 MVB12AQ96EY5 273 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 FAM167AQ96KS9 214 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 SERHLQ9NQF3 203 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 EHD3Q9NZN3 535 aa6.08□□□□□ -1.44
SNHG1-224ENST00000545688 CGB1A6NKQ9 187 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 PDHA1P08559 390 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 EBLN1P0CF75 366 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 ZFXP17010 805 aaPredicted RBP6.07□□□□□ -1.44
SNHG1-224ENST00000545688 PCSK6P29122 969 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 NEK2P51955 445 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 SRSF4Q08170 494 aaKnown RBP6.07□□□□□ -1.44
SNHG1-224ENST00000545688 EIF2B5Q13144 721 aaKnown RBP6.07□□□□□ -1.44
SNHG1-224ENST00000545688 PLS1Q14651 629 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 TBCCQ15814 346 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 FAM160B1Q5W0V3 765 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 KLHDC4Q8TBB5 520 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 DPF1Q92782 380 aa6.07□□□□□ -1.44
SNHG1-224ENST00000545688 AOX1Q06278 1338 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 H3BUI4 141 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 INO80B-WBP1J3KQ70 363 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 PIM1P11309 404 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-224ENST00000545688 HDCP19113 662 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 DRD4P21917 467 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 AKAP5P24588 427 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 CCT8P50990 548 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 ZNF134P52741 427 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 NKX6-1P78426 367 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-224ENST00000545688 BMPR2Q13873 1038 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 CCDC157Q569K6 752 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 FCRLBQ6BAA4 426 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 TMEM108Q6UXF1 575 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 PTF1AQ7RTS3 328 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 PCSK9Q8NBP7 692 aaKnown RBP6.06□□□□□ -1.44
SNHG1-224ENST00000545688 BRIX1Q8TDN6 353 aaKnown RBP6.06□□□□□ -1.44
SNHG1-224ENST00000545688 HASPINQ8TF76 798 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 SLC35A4Q96G79 324 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 SLC46A1Q96NT5 459 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 INO80BQ9C086 356 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-224ENST00000545688 BRINP2Q9C0B6 783 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 TCF7L1Q9HCS4 588 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 AASDHPPTQ9NRN7 309 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 HESX1Q9UBX0 185 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 IP6K2Q9UHH9 426 aa6.06□□□□□ -1.44
SNHG1-224ENST00000545688 PPM1DO15297 605 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 DNAJB5O75953 348 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 ABCG1P45844 678 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 DDB2Q92466 427 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 HOOK2Q96ED9 719 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 TTYH3Q9C0H2 523 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 PADI4Q9UM07 663 aa6.05□□□□□ -1.44
SNHG1-224ENST00000545688 COL3A1P02461 1466 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-224ENST00000545688 DNAJC9-AS1A6NH13 148 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 DCLK1O15075 740 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 ALDH2P05091 517 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 PF4V1P10720 104 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 JUPP14923 745 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 SOX8P57073 446 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 PLAC9Q5JTB6 97 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 EMC10Q5UCC4 262 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 LRCH2Q5VUJ6 765 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 ZNF551Q7Z340 670 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-224ENST00000545688 GRAMD1CQ8IYS0 662 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.04□□□□□ -1.442e-11■■■■■ 59.4
SNHG1-224ENST00000545688 CELF5Q8N6W0 485 aaKnown RBP6.04□□□□□ -1.44
SNHG1-224ENST00000545688 ATRIPQ8WXE1 791 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 ANKS1AQ92625 1134 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 HPS3Q969F9 1004 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 NUP88Q99567 741 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-224ENST00000545688 ARHGEF3Q9NR81 526 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 SERTAD4Q9NUC0 356 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 PCDHA6Q9UN73 950 aa6.04□□□□□ -1.44
SNHG1-224ENST00000545688 NOP58Q9Y2X3 529 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms