RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 CST8O60676 142 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 KCNA3P22001 575 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 MSH2P43246 934 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 TRIM68Q6AZZ1 485 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 LVRNQ6Q4G3 990 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 TRABD2AQ86V40 505 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 SLCO2A1Q92959 643 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 UTP4Q969X6 686 aaKnown RBP15.86■□□□□ 0.13
USP28-214ENST00000545540 TRIM56Q9BRZ2 755 aaKnown RBP15.86■□□□□ 0.13
USP28-214ENST00000545540 CALN1Q9BXU9 219 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 CHKBQ9Y259 395 aa15.86■□□□□ 0.13
USP28-214ENST00000545540 PMM2O15305 246 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 B4GALT5O43286 388 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 POTEJP0CG39 1038 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 ATP5DP30049 168 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 BACE1P56817 501 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 BASP1P80723 227 aaKnown RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 IL9RQ01113 521 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 OTUD4Q01804 1114 aaKnown RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 CDO1Q16878 200 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 WLSQ5T9L3 541 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 DENND1BQ6P3S1 775 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 KATNAL2Q8IYT4 538 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 FAM71DQ8N9W8 422 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 EXD1Q8NHP7 514 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 ZMYND8Q9ULU4 1186 aaPredicted RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 TMEM191CA6NGB0 347 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 TMEM191BP0C7N4 346 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 CAPSQ13938 189 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 LY6KQ17RY6 165 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 GALNTL6Q49A17 601 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 C3orf62Q6ZUJ4 267 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 MAGEB18Q96M61 343 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 SLC17A7Q9P2U7 560 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 CYTH4Q9UIA0 394 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 DNALI1O14645 258 aaPredicted RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 MYBL1P10243 752 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 MMP8P22894 467 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 CTCFP49711 727 aaPredicted RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 GPX6P59796 221 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 BPIFB4P59827 614 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 MTFR1Q15390 333 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 XKR3Q5GH77 459 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 HHATQ5VTY9 493 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 CROCCP2Q86T23 111 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 RTKN2Q8IZC4 609 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 ZCCHC9Q8N567 271 aaKnown RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 PPP1R13LQ8WUF5 828 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 PRR11Q96HE9 360 aaPredicted RBP15.85■□□□□ 0.13
USP28-214ENST00000545540 NLRP4Q96MN2 994 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 SMC6Q96SB8 1091 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 IMPG2Q9BZV3 1241 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 RXFP1Q9HBX9 757 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 UBN1Q9NPG3 1134 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 GINM1Q9NU53 330 aa15.85■□□□□ 0.13
USP28-214ENST00000545540 CNTNAP2Q9UHC6 1331 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 SUPT20HL2P0C7V6 817 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 PSMA2P25787 234 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 SESN3P58005 492 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 SUPT20HL1Q3ZLR7 823 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 ENOSF1Q7L5Y1 443 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 UNC45BQ8IWX7 931 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 RNF149Q8NC42 400 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 NETO2Q8NC67 525 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 SYNCQ9H7C4 482 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 PRKAG3Q9UGI9 489 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 HMGXB4Q9UGU5 601 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 CHMP2BQ9UQN3 213 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 A0A0G2JND7 137 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 PSTPIP1O43586 416 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 FAM155BO75949 473 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 TJP3O95049 919 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 STAT4Q14765 748 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 MAPK6Q16659 721 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 MAIP1Q8WWC4 291 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 AFG3L2Q9Y4W6 797 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
USP28-214ENST00000545540 ASMTLO95671 621 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 NEFHP12036 1026 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 EPHB2P29323 1055 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 PLEKHG4Q58EX7 1191 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 ARFGAP1Q8N6T3 406 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 LRRC8CQ8TDW0 803 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 P3H4Q92791 437 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 FAM81BQ96LP2 452 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 CFAP57Q96MR6 1250 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 TIPINQ9BVW5 301 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
USP28-214ENST00000545540 GEMIN8Q9NWZ8 242 aaKnown RBP15.84■□□□□ 0.13
USP28-214ENST00000545540 IP6K2Q9UHH9 426 aa15.84■□□□□ 0.13
USP28-214ENST00000545540 A0A0B4J269 797 aa15.83■□□□□ 0.13
USP28-214ENST00000545540 OATP04181 439 aa15.83■□□□□ 0.13
USP28-214ENST00000545540 PAX7P23759 505 aa15.83■□□□□ 0.13
USP28-214ENST00000545540 SNRPFP62306 86 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms