RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 UVSSAQ2YD98 709 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 MIIPQ5JXC2 388 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 ATAT1Q5SQI0 421 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 GBP6Q6ZN66 633 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 RIN2Q8WYP3 895 aaPredicted RBP12.71□□□□□ -0.37
LTBR-214ENST00000545445 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 IGSF21Q96ID5 467 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 HPDLQ96IR7 371 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 RTP3Q9BQQ7 232 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 CNTNAP3Q9BZ76 1288 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 MMRN2Q9H8L6 949 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 RAB20Q9NX57 234 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 TAB2Q9NYJ8 693 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 ADAM28Q9UKQ2 775 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 PRG3Q9Y2Y8 225 aaPredicted RBP12.71□□□□□ -0.37
LTBR-214ENST00000545445 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 ANK1P16157 1881 aa12.71□□□□□ -0.37
LTBR-214ENST00000545445 TDRD15B5MCY1 1934 aaKnown RBP12.7□□□□□ -0.38
LTBR-214ENST00000545445 SF3B1O75533 1304 aaKnown RBP eCLIP12.7□□□□□ -0.38
LTBR-214ENST00000545445 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 NT5C1B-RDH14C9J2C7 533 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 NARSO43776 548 aaKnown RBP12.7□□□□□ -0.38
LTBR-214ENST00000545445 KIF4AO95239 1232 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 CST3P01034 146 aaPredicted RBP12.7□□□□□ -0.38
LTBR-214ENST00000545445 TPM3P06753 285 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 FAM163BP0C2L3 166 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 P4HA1P13674 534 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.38
LTBR-214ENST00000545445 TDGQ13569 410 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 PUM1Q14671 1186 aaKnown RBP eCLIP12.7□□□□□ -0.38
LTBR-214ENST00000545445 BMS1Q14692 1282 aaKnown RBP12.7□□□□□ -0.38
LTBR-214ENST00000545445 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 APTXQ7Z2E3 356 aaKnown RBP12.7□□□□□ -0.38
LTBR-214ENST00000545445 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 TAS1R2Q8TE23 839 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 PAAF1Q9BRP4 392 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 RBSNQ9H1K0 784 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 VPS16Q9H269 839 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 GDAP2Q9NXN4 497 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 DUSP12Q9UNI6 340 aa12.7□□□□□ -0.38
LTBR-214ENST00000545445 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
LTBR-214ENST00000545445 KMT2BQ9UMN6 2715 aaPredicted RBP12.69□□□□□ -0.38
LTBR-214ENST00000545445 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 VNN1O95497 513 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 CXCL14O95715 111 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 ASS1P00966 412 aaKnown RBP12.69□□□□□ -0.38
LTBR-214ENST00000545445 MYL6P60660 151 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 FANCCQ00597 558 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 EXOC3L4Q17RC7 722 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 ZNF699Q32M78 642 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 CCDC149Q6ZUS6 474 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
LTBR-214ENST00000545445 TMEM173Q86WV6 379 aaPredicted RBP12.69□□□□□ -0.38
LTBR-214ENST00000545445 GPR65Q8IYL9 337 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 ACSF2Q96CM8 615 aaPredicted RBP12.69□□□□□ -0.38
LTBR-214ENST00000545445 SUSD3Q96L08 255 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 ZBP1Q9H171 429 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 FAM124BQ9H5Z6 455 aaPredicted RBP12.69□□□□□ -0.38
LTBR-214ENST00000545445 MARCH5Q9NX47 278 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 DSEQ9UL01 958 aa12.69□□□□□ -0.38
LTBR-214ENST00000545445 MYO10Q9HD67 2058 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 A0A1B0GTH6 734 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 M0QZQ0 153 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 STK25O00506 426 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 SYN3O14994 580 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 CBFA2T2O43439 604 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 CFHP08603 1231 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 ODC1P11926 461 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 RFX1P22670 979 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 UBASH3AP57075 661 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 TNNC1P63316 161 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 NOP14P78316 857 aaKnown RBP12.68□□□□□ -0.38
LTBR-214ENST00000545445 UBXN1Q04323 297 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 WDR72Q3MJ13 1102 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 PDXDC1Q6P996 788 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 SARM1Q6SZW1 724 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 CD300LGQ6UXG3 332 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 DSTYKQ6XUX3 929 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.68□□□□□ -0.38
LTBR-214ENST00000545445 OTOP3Q7RTS5 596 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 TMEM86AQ8N2M4 240 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 DCLK2Q8N568 766 aa12.68□□□□□ -0.38
LTBR-214ENST00000545445 TTC39CQ8N584 583 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms