RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
PAAF1-215ENST00000544909 P3H1Q32P28 736 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 SPDYAQ5MJ70 313 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 ZBTB41Q5SVQ8 909 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 FBXW10Q5XX13 1052 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 GPAT2Q6NUI2 795 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 BBS12Q6ZW61 710 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 NT5DC4Q86YG4 428 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 PASD1Q8IV76 773 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 MAML1Q92585 1016 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 TCHPQ9BT92 498 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 HAUS2Q9NVX0 235 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
PAAF1-215ENST00000544909 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 ARL2BPQ9Y2Y0 163 aa13.14□□□□□ -0.31
PAAF1-215ENST00000544909 A0A0G2JLL6 359 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CXCL11O14625 94 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 HBP1O60381 514 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 EDN1P05305 212 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 P4HA1P13674 534 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CD58P19256 250 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 SLC8A1P32418 973 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 GABRB2P47870 512 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 MYL6P60660 151 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 IL9RQ01113 521 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 MFSD7Q6UXD7 560 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 PRRT2Q7Z6L0 340 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 GPR20Q99678 358 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 HEMGNQ9BXL5 484 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 FRMD8Q9BZ67 464 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 ASB7Q9H672 318 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 PRMT7Q9NVM4 692 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 DNPEPQ9ULA0 475 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 KIAA1257Q9ULG3 409 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 NAALADL1Q9UQQ1 740 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CSADQ9Y600 493 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 IVNS1ABPQ9Y6Y0 642 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 EXOC1LA0A1B0GW35 172 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 MGRN1O60291 552 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CST3P01034 146 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CFHP08603 1231 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 PHBP35232 272 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 PCK1P35558 622 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 ARSEP51690 589 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 VGLL4Q14135 290 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 STILQ15468 1287 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 RNASEH2BQ5TBB1 312 aaKnown RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 ATF7IP2Q5U623 682 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 RNF43Q68DV7 783 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 CYB5D1Q6P9G0 228 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 TRABD2AQ86V40 505 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
PAAF1-215ENST00000544909 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-215ENST00000544909 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 ZBTB42B2RXF5 422 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 RASA4BC9J798 803 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 E7ESA3 106 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 RASA4O43374 803 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 HMGCRP04035 888 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 STX2P32856 288 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 MTFR1Q15390 333 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 GALNTL6Q49A17 601 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 PPIL6Q8IXY8 311 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 PRKAG3Q9UGI9 489 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 USTQ9Y2C2 406 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 ZSWIM8A7E2V4 1837 aa13.12□□□□□ -0.31
PAAF1-215ENST00000544909 DICER1Q9UPY3 1922 aaKnown RBP13.12□□□□□ -0.31
PAAF1-215ENST00000544909 LRRD1A4D1F6 860 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ZNF487B1APH4 448 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 SPAG6O75602 509 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 MCF2P10911 925 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 KRT3P12035 628 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 SSR1P43307 286 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 SNCBQ16143 134 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 ZNF667Q5HYK9 610 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 UBAP2Q5T6F2 1119 aaKnown RBP13.11□□□□□ -0.31
PAAF1-215ENST00000544909 SPATA21Q7Z572 469 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
PAAF1-215ENST00000544909 PARP9Q8IXQ6 854 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms