RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	LMBRD2	Q68DH5	695 aa	Predicted RBP	6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	SP5	Q6BEB4	398 aa	Predicted RBP	6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	KSR2	Q6VAB6	950 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	SNX19	Q92543	992 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	LARP4B	Q92615	738 aa	Known RBP	6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	SLC46A1	Q96NT5	459 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	TTYH3	Q9C0H2	523 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	SMURF2	Q9HAU4	748 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	XPR1	Q9UBH6	696 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	TES	Q9UGI8	421 aa	Known RBP	6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	TMX2	Q9Y320	296 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506	RAD54B	Q9Y620	910 aa		6.52	□□□□□ -1.37
LEMD3-205	ENST00000544506		A0A087WWL8	130 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	PIPSL	A2A3N6	862 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	DCLK1	O15075	740 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	TBC1D4	O60343	1298 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	EGR2	P11161	476 aa	Predicted RBP	6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	GATA3	P23771	443 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	ZEB1	P37275	1124 aa	Predicted RBP	6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	NPTX2	P47972	431 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	GCLC	P48506	637 aa	Predicted RBP	6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	HLX	Q14774	488 aa	Predicted RBP	6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	SAFB	Q15424	915 aa	Known RBP eCLIP	6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	CNGA2	Q16280	664 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	LONRF3	Q496Y0	759 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	AMOT	Q4VCS5	1084 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	MICALCL	Q6ZW33	695 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	ZNF627	Q7L945	461 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	DNAJC5G	Q8N7S2	189 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	SSH3	Q8TE77	659 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	NEU4	Q8WWR8	484 aa	Predicted RBP	6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	SUCLG2	Q96I99	432 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	HEPH	Q9BQS7	1158 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	KIAA1586	Q9HCI6	787 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	SACM1L	Q9NTJ5	587 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	INTS13	Q9NVM9	706 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	OGDHL	Q9ULD0	1010 aa		6.51	□□□□□ -1.37
LEMD3-205	ENST00000544506	APAF1	O14727	1248 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	PQBP1	O60828	265 aa	Known RBP	6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	SOAT2	O75908	522 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	MAP4K4	O95819	1239 aa	Predicted RBP	6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	KRT18	P05783	430 aa	Known RBP	6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	ITGAL	P20701	1170 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	NDUFV1	P49821	464 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	ZNF134	P52741	427 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	FMO1	Q01740	532 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	ABHD17B	Q5VST6	288 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	SLC15A4	Q8N697	577 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	PTCD3	Q96EY7	689 aa	Known RBP	6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	ARNT2	Q9HBZ2	717 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	TBCCD1	Q9NVR7	557 aa		6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	AFF4	Q9UHB7	1163 aa	Known RBP	6.5	□□□□□ -1.37
LEMD3-205	ENST00000544506	TRIM43B	A6NCK2	446 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	TMEM233	B4DJY2	109 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	MYO1C	O00159	1063 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	PMM2	O15305	246 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	MYL1	P05976	194 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	VIPR2	P41587	438 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	RAB32	Q13637	225 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	IQCB1	Q15051	598 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506		Q6ZPA2	131 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	NOL8	Q76FK4	1167 aa	Known RBP	6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	SESTD1	Q86VW0	696 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	VRK3	Q8IV63	474 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	KRT78	Q8N1N4	520 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	MPP5	Q8N3R9	675 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	PJA1	Q8NG27	643 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	TRIM43	Q96BQ3	446 aa	Predicted RBP	6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	BTBD1	Q9H0C5	482 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	NUP62CL	Q9H1M0	184 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	ZNF287	Q9HBT7	754 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506	SPATA31A3	Q5VYP0	1347 aa		6.49	□□□□□ -1.37
LEMD3-205	ENST00000544506		A0A0B4J269	797 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	GRID2IP	A4D2P6	1211 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506		F5H697	171 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	ATXN1L	P0C7T5	689 aa	Known RBP	6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	SLC5A1	P13866	664 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	PPP3CB	P16298	524 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	ACVRL1	P37023	503 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	LOXL3	P58215	753 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	LILRA4	P59901	499 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	TUBB3	Q13509	450 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	SF3B3	Q15393	1217 aa	Known RBP	6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	SLC44A4	Q53GD3	710 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	C3orf38	Q5JPI3	329 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	RBM20	Q5T481	1227 aa	Known RBP	6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	TMEM108	Q6UXF1	575 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506		Q6YL49	198 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	USP51	Q70EK9	711 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	MICU3	Q86XE3	530 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	LCORL	Q8N3X6	602 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	LNX2	Q8N448	690 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	SLC30A5	Q8TAD4	765 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	NMD3	Q96D46	503 aa	Known RBP	6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506		Q96MF0	132 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	MOGAT1	Q96PD6	335 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	ZNF518B	Q9C0D4	1074 aa		6.48	□□□□□ -1.37
LEMD3-205	ENST00000544506	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.48	□□□□□ -1.37

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