RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 CASKIN2Q8WXE0 1202 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 DDX27Q96GQ7 796 aaKnown RBP17■□□□□ 0.31
SPDEF-202ENST00000544425 HEXIM2Q96MH2 286 aaKnown RBP17■□□□□ 0.31
SPDEF-202ENST00000544425 CHST12Q9NRB3 414 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 RNF186Q9NXI6 227 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 AMACRQ9UHK6 382 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 IPPQ9Y573 584 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 CDY2AQ9Y6F7 541 aa17■□□□□ 0.31
SPDEF-202ENST00000544425 O00370 1275 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 FSCN2O14926 492 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 GABRB2P47870 512 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 DHX34Q14147 1143 aaKnown RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 SMG8Q8ND04 991 aaKnown RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 C18orf25Q96B23 403 aaPredicted RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 C18orf8Q96DM3 657 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PKNOX2Q96KN3 472 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 CAPNS2Q96L46 248 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 RUNDC3BQ96NL0 473 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 TUBGCP4Q9UGJ1 667 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 FAM187AA6NFU0 413 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 ZSCAN5CA6NGD5 496 aaPredicted RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 SIGLEC16A6NMB1 481 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PHF2O75151 1096 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 MICAL2O94851 1124 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 ASGR1P07306 291 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 HOXD10P28358 340 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PNPLA4P41247 253 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 GPD2P43304 727 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 RPL7AP62424 266 aaKnown RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 CAP1Q01518 475 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PIGHQ14442 188 aaPredicted RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 ZNF268Q14587 947 aaPredicted RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PTPN20Q4JDL3 420 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 LCLAT1Q6UWP7 414 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 UNC93AQ86WB7 457 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 GSPT2Q8IYD1 628 aaKnown RBP16.99■□□□□ 0.31
SPDEF-202ENST00000544425 NIPA2Q8N8Q9 360 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PRELID2Q8N945 189 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 MAIP1Q8WWC4 291 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 ERVK-5Q9HDB9 667 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PARP2Q9UGN5 583 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 PCYOX1Q9UHG3 505 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 CYTH4Q9UIA0 394 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 SNX9Q9Y5X1 595 aa16.99■□□□□ 0.31
SPDEF-202ENST00000544425 CCND3P30281 292 aaPredicted RBP16.98■□□□□ 0.31
SPDEF-202ENST00000544425 TNNT3P45378 269 aaPredicted RBP16.98■□□□□ 0.31
SPDEF-202ENST00000544425 KCNA10Q16322 511 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 LRRC38Q5VT99 294 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 DCUN1D2Q6PH85 259 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 KATNAL2Q8IYT4 538 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 ZDHHC14Q8IZN3 488 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 PCSK9Q8NBP7 692 aaKnown RBP16.98■□□□□ 0.31
SPDEF-202ENST00000544425 IFT81Q8WYA0 676 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 GDAP2Q9NXN4 497 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 SRRDQ9UH36 339 aa16.98■□□□□ 0.31
SPDEF-202ENST00000544425 MGAMO43451 1857 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 PPEF2O14830 753 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 RPS6KA5O75582 802 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 PRKAR2AP13861 404 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 MGAT3Q09327 533 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 SIX1Q15475 284 aaPredicted RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 MAP3K21Q5TCX8 1036 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 TWF2Q6IBS0 349 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 SND1Q7KZF4 910 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 C12orf50Q8NA57 414 aaPredicted RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 FNIP1Q8TF40 1166 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 APOL6Q9BWW8 343 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 SENP6Q9GZR1 1112 aaPredicted RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 ZMYND15Q9H091 742 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 RAB17Q9H0T7 212 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 HPCAL4Q9UM19 191 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 NFU1Q9UMS0 254 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 ST3GAL5Q9UNP4 418 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 UTP11Q9Y3A2 253 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 ESYT3A0FGR9 886 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 TTI1O43156 1089 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 CHRNA1P02708 482 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 AARSP49588 968 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 DRG2P55039 364 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 TAS2R40P59535 323 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 DR1Q01658 176 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 ORC1Q13415 861 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 FAM47CQ5HY64 1035 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 FBXO47Q5MNV8 452 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 LIMS2Q7Z4I7 341 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 ADAT2Q7Z6V5 191 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 EXD1Q8NHP7 514 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 MAGOHBQ96A72 148 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 ZNF560Q96MR9 790 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 MCEEQ96PE7 176 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 MRPL45Q9BRJ2 306 aaKnown RBP16.97■□□□□ 0.31
SPDEF-202ENST00000544425 MIS12Q9H081 205 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 LRRC19Q9H756 370 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 KLK14Q9P0G3 267 aa16.97■□□□□ 0.31
SPDEF-202ENST00000544425 GJB6O95452 261 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms