RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 TMEM35BQ8NCS4 154 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 TRIM43Q96BQ3 446 aaPredicted RBP32.34■■■□□ 2.77
CCM2-219ENST00000544363 VWCEQ96DN2 955 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 NAPGQ99747 312 aaPredicted RBP32.34■■■□□ 2.77
CCM2-219ENST00000544363 LHX5Q9H2C1 402 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 GTF3C4Q9UKN8 822 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 CEP83Q9Y592 693 aa32.34■■■□□ 2.77
CCM2-219ENST00000544363 B3GAT3O94766 335 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 DDHD2O94830 711 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 IKBKEQ14164 716 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 TCEAL1Q15170 157 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 DCLRE1AQ6PJP8 1040 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 DSTYKQ6XUX3 929 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 ACOT1Q86TX2 421 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 ZNF280BQ86YH2 543 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 PHF13Q86YI8 300 aaPredicted RBP32.33■■■□□ 2.77
CCM2-219ENST00000544363 ZNF653Q96CK0 615 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 TRIM11Q96F44 468 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 PRDM5Q9NQX1 630 aaPredicted RBP32.33■■■□□ 2.77
CCM2-219ENST00000544363 WDR3Q9UNX4 943 aaKnown RBP eCLIP32.33■■■□□ 2.77
CCM2-219ENST00000544363 STXBP5LQ9Y2K9 1186 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 PCDHGC5Q9Y5F6 944 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 O00370 1275 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 HOXA2O43364 376 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 CYP1A2P05177 515 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 WSCD1Q658N2 575 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 DENND1BQ6P3S1 775 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 MON1BQ7L1V2 547 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 DNAI2Q9GZS0 605 aa32.33■■■□□ 2.77
CCM2-219ENST00000544363 MYBL1P10243 752 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 EN2P19622 333 aaPredicted RBP32.32■■■□□ 2.76
CCM2-219ENST00000544363 RNASELQ05823 741 aaKnown RBP32.32■■■□□ 2.76
CCM2-219ENST00000544363 STILQ15468 1287 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 TIGD5Q53EQ6 642 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 CD300LGQ6UXG3 332 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 UBE2Q1Q7Z7E8 422 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 OSTM1Q86WC4 334 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 NPAS4Q8IUM7 802 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 COLGALT2Q8IYK4 626 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 CRYBG2Q8N1P7 616 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 TMEM86AQ8N2M4 240 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 WDTC1Q8N5D0 677 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 VCPIP1Q96JH7 1222 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 CASD1Q96PB1 797 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 OSGEPQ9NPF4 335 aa32.32■■■□□ 2.76
CCM2-219ENST00000544363 MYH10P35580 1976 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 PALMO75781 387 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 MICAL2O94851 1124 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 PDGFRBP09619 1106 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 LMO2P25791 158 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 ITGB8P26012 769 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 C12orf29Q8N999 325 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 C1orf131Q8NDD1 294 aaKnown RBP32.31■■■□□ 2.76
CCM2-219ENST00000544363 TPCN2Q8NHX9 752 aa32.31■■■□□ 2.76
CCM2-219ENST00000544363 FAM193BQ96PV7 902 aaPredicted RBP32.31■■■□□ 2.76
CCM2-219ENST00000544363 MICAL3Q7RTP6 2002 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 GRID2IPA4D2P6 1211 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 GABRDO14764 452 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 B4GALT3O60512 393 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 HADHBP55084 474 aaKnown RBP32.3■■■□□ 2.76
CCM2-219ENST00000544363 LCLAT1Q6UWP7 414 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 CALR3Q96L12 384 aaKnown RBP32.3■■■□□ 2.76
CCM2-219ENST00000544363 DPEP3Q9H4B8 488 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 ADAM22Q9P0K1 906 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 CTTNBP2NLQ9P2B4 639 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 CNOT8Q9UFF9 292 aaKnown RBP32.3■■■□□ 2.76
CCM2-219ENST00000544363 JRKLQ9Y4A0 524 aa32.3■■■□□ 2.76
CCM2-219ENST00000544363 ATMINO43313 823 aaPredicted RBP32.29■■■□□ 2.76
CCM2-219ENST00000544363 HCRTO43612 131 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 RAG1P15918 1043 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 C1QBPQ07021 282 aaKnown RBP32.29■■■□□ 2.76
CCM2-219ENST00000544363 AVENQ9NQS1 362 aaPredicted RBP32.29■■■□□ 2.76
CCM2-219ENST00000544363 URI1O94763 535 aaPredicted RBP32.29■■■□□ 2.76
CCM2-219ENST00000544363 MMP8P22894 467 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 GATMP50440 423 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 PTP4A2Q12974 167 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 PAN2Q504Q3 1202 aaKnown RBP32.29■■■□□ 2.76
CCM2-219ENST00000544363 RSPH1Q8WYR4 309 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 TNIP3Q96KP6 325 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 C11orf70Q9BRQ4 267 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 COG5Q9UP83 839 aa32.29■■■□□ 2.76
CCM2-219ENST00000544363 MTA2O94776 668 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 ODC1P11926 461 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 BRCC3P46736 316 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 LHX1P48742 406 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 PPP1R26Q5T8A7 1209 aaPredicted RBP32.28■■■□□ 2.76
CCM2-219ENST00000544363 LIN9Q5TKA1 542 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 ARHGAP17Q68EM7 881 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 MFSD5Q6N075 450 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP32.28■■■□□ 2.76
CCM2-219ENST00000544363 MMS22LQ6ZRQ5 1243 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 UVRAGQ9P2Y5 699 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 TSPAN16Q9UKR8 245 aa32.28■■■□□ 2.76
CCM2-219ENST00000544363 M0QYV0 167 aa32.27■■■□□ 2.76
CCM2-219ENST00000544363 M0QZQ0 153 aa32.27■■■□□ 2.76
CCM2-219ENST00000544363 ENC1O14682 589 aa32.27■■■□□ 2.76
CCM2-219ENST00000544363 KIF4AO95239 1232 aa32.27■■■□□ 2.76
CCM2-219ENST00000544363 LRRC57Q8N9N7 239 aa32.27■■■□□ 2.76
CCM2-219ENST00000544363 SPATA18Q8TC71 538 aa32.27■■■□□ 2.76
CCM2-219ENST00000544363 CHORDC1Q9UHD1 332 aaPredicted RBP32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms