RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 MYL7Q01449 175 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 INTS6LQ5JSJ4 861 aaKnown RBP23.35■■□□□ 1.33
OTUB1-212ENST00000543988 GET4Q7L5D6 327 aaPredicted RBP23.35■■□□□ 1.33
OTUB1-212ENST00000543988 MYADMQ96S97 322 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 PKMYT1Q99640 499 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 ACBD6Q9BR61 282 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 MRPL45Q9BRJ2 306 aaKnown RBP23.35■■□□□ 1.33
OTUB1-212ENST00000543988 NUP62CLQ9H1M0 184 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 MMRN2Q9H8L6 949 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 VRTNQ9H8Y1 702 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 TMLHEQ9NVH6 421 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 MUTYHQ9UIF7 546 aa23.35■■□□□ 1.33
OTUB1-212ENST00000543988 MTCL1Q9Y4B5 1905 aaKnown RBP23.35■■□□□ 1.33
OTUB1-212ENST00000543988 SOAT2O75908 522 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 CLSTN1O94985 981 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 HLA-DRAP01903 254 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 FSHRP23945 695 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 PCSK1P29120 753 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 PAK1Q13153 545 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 PABPC1LQ4VXU2 614 aaKnown RBP23.34■■□□□ 1.33
OTUB1-212ENST00000543988 DCP1BQ8IZD4 617 aaKnown RBP23.34■■□□□ 1.33
OTUB1-212ENST00000543988 ZDHHC14Q8IZN3 488 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 GPT2Q8TD30 523 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 TAS1R2Q8TE23 839 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 SMYD3Q9H7B4 428 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 CEP72Q9P209 647 aa23.34■■□□□ 1.33
OTUB1-212ENST00000543988 GOLGA6L22H0YM25 854 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 TACC1O75410 805 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 RHOP08100 348 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 LMO2P25791 158 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 GBP2P32456 591 aaPredicted RBP23.33■■□□□ 1.33
OTUB1-212ENST00000543988 STX17P56962 302 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 FOXR2Q6PJQ5 311 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 SCARA5Q6ZMJ2 495 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 ACSF2Q96CM8 615 aaPredicted RBP23.33■■□□□ 1.33
OTUB1-212ENST00000543988 SEPT5Q99719 369 aaPredicted RBP23.33■■□□□ 1.33
OTUB1-212ENST00000543988 ABI2Q9NYB9 513 aaPredicted RBP23.33■■□□□ 1.33
OTUB1-212ENST00000543988 NME7Q9Y5B8 376 aa23.33■■□□□ 1.33
OTUB1-212ENST00000543988 BICDL2A1A5D9 508 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 ASS1P00966 412 aaKnown RBP23.32■■□□□ 1.32
OTUB1-212ENST00000543988 GTF2H1P32780 548 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 PSMC1P62191 440 aaKnown RBP23.32■■□□□ 1.32
OTUB1-212ENST00000543988 SMARCB1Q12824 385 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 PLD1Q13393 1074 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 ZNF667Q5HYK9 610 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 ITFG1Q8TB96 612 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 C2orf15Q8WU43 125 aaKnown RBP23.32■■□□□ 1.32
OTUB1-212ENST00000543988 CEP63Q96MT8 703 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 SYT15Q9BQS2 421 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 CORO1BQ9BR76 489 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 PI4K2AQ9BTU6 479 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 DNAJC25Q9H1X3 360 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 TMEM8AQ9HCN3 771 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.32■■□□□ 1.321e-7■■■■■ 54.3
OTUB1-212ENST00000543988 HSFX1Q9UBD0 423 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 ARMCX3Q9UH62 379 aaPredicted RBP23.32■■□□□ 1.32
OTUB1-212ENST00000543988 PCDHB5Q9Y5E4 795 aa23.32■■□□□ 1.32
OTUB1-212ENST00000543988 DCXO43602 365 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 ATP2C2O75185 946 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 RAP1GAPP47736 663 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 MXI1P50539 228 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 NFE2Q16621 373 aaPredicted RBP23.31■■□□□ 1.32
OTUB1-212ENST00000543988 SLC5A9Q2M3M2 681 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 SGSM1Q2NKQ1 1148 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 DCAF17Q5H9S7 520 aaPredicted RBP23.31■■□□□ 1.32
OTUB1-212ENST00000543988 SPOPLQ6IQ16 392 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 ELMOD1Q8N336 334 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 SPPL2BQ8TCT7 592 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 TAF4BQ92750 862 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 SDCBP2Q9H190 292 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 SNX25Q9H3E2 840 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 EPHX3Q9H6B9 360 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 LIMD1Q9UGP4 676 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 GTF3C4Q9UKN8 822 aa23.31■■□□□ 1.32
OTUB1-212ENST00000543988 MYBPHLA2RUH7 354 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 ASGR2P07307 311 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 PDGFRBP09619 1106 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 PTPN2P17706 415 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 ATF6P18850 670 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 ALDH1A3P47895 512 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 MGAT5BQ3V5L5 792 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 TCERG1LQ5VWI1 586 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 KRT39Q6A163 491 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 HS6ST3Q8IZP7 471 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 PLCD3Q8N3E9 789 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 ING5Q8WYH8 240 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 CRTAC1Q9NQ79 661 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 AVENQ9NQS1 362 aaPredicted RBP23.3■■□□□ 1.32
OTUB1-212ENST00000543988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.3■■□□□ 1.32
OTUB1-212ENST00000543988 EPS15L1Q9UBC2 864 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 CDH9Q9ULB4 789 aa23.3■■□□□ 1.32
OTUB1-212ENST00000543988 MRPS23Q9Y3D9 190 aaKnown RBP23.3■■□□□ 1.32
OTUB1-212ENST00000543988 PI4K2BG5E9Z4 385 aa23.29■■□□□ 1.32
OTUB1-212ENST00000543988 NRG2O14511 850 aaPredicted RBP23.29■■□□□ 1.32
OTUB1-212ENST00000543988 STX10O60499 249 aa23.29■■□□□ 1.32
OTUB1-212ENST00000543988 FAM163BP0C2L3 166 aa23.29■■□□□ 1.32
OTUB1-212ENST00000543988 HAPLN1P10915 354 aaPredicted RBP23.29■■□□□ 1.32
OTUB1-212ENST00000543988 GNL1P36915 607 aaPredicted RBP23.29■■□□□ 1.32
OTUB1-212ENST00000543988 CCR2P41597 374 aa23.29■■□□□ 1.32
OTUB1-212ENST00000543988 ASPAP45381 313 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms