RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 DPP3Q9NY33 737 aa24.45■■□□□ 1.5
CDKN3-207ENST00000543789 ZMYM5Q9UJ78 669 aa24.45■■□□□ 1.5
CDKN3-207ENST00000543789 PLCG1P19174 1290 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 MCM2P49736 904 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 TAF6P49848 677 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 PTPAQ15257 358 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 ITPRIPL2Q3MIP1 535 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 WSCD1Q658N2 575 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 PRR23CQ6ZRP0 262 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 CEP68Q76N32 757 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 LRRTM3Q86VH5 581 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 GKN1Q9NS71 199 aa24.44■■□□□ 1.5
CDKN3-207ENST00000543789 AGO2Q9UKV8 859 aaKnown RBP24.44■■□□□ 1.5
CDKN3-207ENST00000543789 TICRRQ7Z2Z1 1910 aa24.43■■□□□ 1.5
CDKN3-207ENST00000543789 HAPLN1P10915 354 aaPredicted RBP24.43■■□□□ 1.5
CDKN3-207ENST00000543789 LONP1P36776 959 aaKnown RBP24.43■■□□□ 1.5
CDKN3-207ENST00000543789 POU5F1Q01860 360 aaKnown RBP24.43■■□□□ 1.5
CDKN3-207ENST00000543789 KARSQ15046 597 aaKnown RBP24.43■■□□□ 1.5
CDKN3-207ENST00000543789 ZC2HC1CQ53FD0 456 aaPredicted RBP24.43■■□□□ 1.5
CDKN3-207ENST00000543789 WDR5BQ86VZ2 330 aa24.43■■□□□ 1.5
CDKN3-207ENST00000543789 CMTM8Q8IZV2 173 aa24.43■■□□□ 1.5
CDKN3-207ENST00000543789 SPPL2BQ8TCT7 592 aa24.43■■□□□ 1.5
CDKN3-207ENST00000543789 SMG9Q9H0W8 520 aaKnown RBP24.43■■□□□ 1.5
CDKN3-207ENST00000543789 STYXL1Q9Y6J8 313 aa24.43■■□□□ 1.5
CDKN3-207ENST00000543789 TISP43B9A030 160 aa24.42■■□□□ 1.5
CDKN3-207ENST00000543789 FOXD2O60548 495 aaPredicted RBP24.42■■□□□ 1.5
CDKN3-207ENST00000543789 BMP15O95972 392 aa24.42■■□□□ 1.5
CDKN3-207ENST00000543789 DCP1BQ8IZD4 617 aaKnown RBP24.42■■□□□ 1.5
CDKN3-207ENST00000543789 FAM160A2Q8N612 972 aaPredicted RBP24.42■■□□□ 1.5
CDKN3-207ENST00000543789 CCSER1Q9C0I3 900 aa24.42■■□□□ 1.5
CDKN3-207ENST00000543789 ST6GALNAC4Q9H4F1 302 aa24.42■■□□□ 1.5
CDKN3-207ENST00000543789 ABI2Q9NYB9 513 aaPredicted RBP24.42■■□□□ 1.5
CDKN3-207ENST00000543789 ADRB1P08588 477 aa24.41■■□□□ 1.5
CDKN3-207ENST00000543789 DDIT3P35638 169 aa24.41■■□□□ 1.5
CDKN3-207ENST00000543789 GRIN1Q05586 938 aa24.41■■□□□ 1.5
CDKN3-207ENST00000543789 C8orf34Q49A92 452 aa24.41■■□□□ 1.5
CDKN3-207ENST00000543789 KRI1Q8N9T8 703 aaKnown RBP24.41■■□□□ 1.5
CDKN3-207ENST00000543789 LARP4BQ92615 738 aaKnown RBP24.41■■□□□ 1.5
CDKN3-207ENST00000543789 FAM83CQ9BQN1 747 aa24.41■■□□□ 1.5
CDKN3-207ENST00000543789 SPTBN2O15020 2390 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 KPNA7A9QM74 516 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 EXTL3O43909 919 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 DDX6P26196 483 aaKnown RBP eCLIP24.4■■□□□ 1.5
CDKN3-207ENST00000543789 HOXC13P31276 330 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 AVPR1AP37288 418 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 GRSF1Q12849 480 aaKnown RBP eCLIP24.4■■□□□ 1.5
CDKN3-207ENST00000543789 RUNX3Q13761 415 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 PPM1JQ5JR12 505 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 ZNF720Q7Z2F6 126 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 MAB21L3Q8N8X9 362 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 PCDHB5Q9Y5E4 795 aa24.4■■□□□ 1.5
CDKN3-207ENST00000543789 PDCD11Q14690 1871 aaKnown RBP24.4■■□□□ 1.5
CDKN3-207ENST00000543789 GDF9O60383 454 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 F11P03951 625 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 NLRP12P59046 1061 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 BFSP1Q12934 665 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 POSTNQ15063 836 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 SV2CQ496J9 727 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 TMEM196Q5HYL7 178 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 LARP1BQ659C4 914 aaKnown RBP24.39■■□□□ 1.49
CDKN3-207ENST00000543789 CRELD2Q6UXH1 353 aaPredicted RBP24.39■■□□□ 1.49
CDKN3-207ENST00000543789 TMEM150AQ86TG1 271 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 POMGNT1Q8WZA1 660 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 SMC3Q9UQE7 1217 aa24.39■■□□□ 1.49
CDKN3-207ENST00000543789 ATG13O75143 517 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 IL18RAPO95256 599 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 HMGA1P17096 107 aaKnown RBP24.38■■□□□ 1.49
CDKN3-207ENST00000543789 NT5DC4Q86YG4 428 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 EFCAB13Q8IY85 973 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 USP13Q92995 863 aaPredicted RBP24.38■■□□□ 1.49
CDKN3-207ENST00000543789 EBF3Q9H4W6 596 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 HPS4Q9NQG7 708 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 TDP1Q9NUW8 608 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 CCL26Q9Y258 94 aa24.38■■□□□ 1.49
CDKN3-207ENST00000543789 CCDC163A0A0D9SF12 145 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 SOBPA7XYQ1 873 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 TRDMT1O14717 391 aaKnown RBP24.37■■□□□ 1.49
CDKN3-207ENST00000543789 AXIN1O15169 862 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 ADSSP30520 456 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 AMPD2Q01433 879 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 TSPY1Q01534 308 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 SF3A1Q15459 793 aaKnown RBP24.37■■□□□ 1.49
CDKN3-207ENST00000543789 NFE2Q16621 373 aaPredicted RBP24.37■■□□□ 1.49
CDKN3-207ENST00000543789 TRIM68Q6AZZ1 485 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 FSTL4Q6MZW2 842 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 CC2D1AQ6P1N0 951 aaPredicted RBP24.37■■□□□ 1.49
CDKN3-207ENST00000543789 PKN3Q6P5Z2 889 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 BRAPQ7Z569 592 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 MRPS31Q92665 395 aaKnown RBP24.37■■□□□ 1.49
CDKN3-207ENST00000543789 LOXL4Q96JB6 756 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 ZNF560Q96MR9 790 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 IKZF4Q9H2S9 585 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 KIF9Q9HAQ2 790 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 TMLHEQ9NVH6 421 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 SLC8A2Q9UPR5 921 aa24.37■■□□□ 1.49
CDKN3-207ENST00000543789 TPRP12270 2363 aaKnown RBP24.37■■□□□ 1.49
CDKN3-207ENST00000543789 OTOL1A6NHN0 477 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-207ENST00000543789 TULP1O00294 542 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-207ENST00000543789 PRPF40AO75400 957 aaKnown RBP24.36■■□□□ 1.49
CDKN3-207ENST00000543789 CSH1P0DML2 217 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms