RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PLEKP08567 350 aaPredicted RBP9.32□□□□□ -0.92
VPS13D-212ENST00000543766 SLC9A1P19634 815 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 PDHA2P29803 388 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 ETV5P41161 510 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 ETV1P50549 477 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 NAA20P61599 178 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 PFKPQ01813 784 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 RHAGQ02094 409 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 ENPEPQ07075 957 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 AOC3Q16853 763 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 USP39Q53GS9 565 aaKnown RBP9.32□□□□□ -0.92
VPS13D-212ENST00000543766 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.32□□□□□ -0.92
VPS13D-212ENST00000543766 TRPC4APQ8TEL6 797 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 MED16Q9Y2X0 877 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 USP31Q70CQ4 1352 aa9.32□□□□□ -0.92
VPS13D-212ENST00000543766 MATN2O00339 956 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 IKBKBO14920 756 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ADAMTS4O75173 837 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 AXLP30530 894 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 COL9A2Q14055 689 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SLC10A5Q5PT55 438 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SCYL2Q6P3W7 929 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 OTOP3Q7RTS5 596 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 RHOT2Q8IXI1 618 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 FAM178BQ8IXR5 827 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 TEX47Q8TBZ9 253 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 FBF1Q8TES7 1133 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SYT15Q9BQS2 421 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 CYP4F12Q9HCS2 524 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 LARSQ9P2J5 1176 aaKnown RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 DNM3Q9UQ16 869 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 JCADQ9P266 1359 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 PIK3C2AO00443 1686 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 A0A087WWV3 80 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 H3BRB1 525 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 DNALI1O14645 258 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SHOXO15266 292 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 POLR2DO15514 142 aaKnown RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 MX2P20592 715 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 CTHP32929 405 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SCRN3Q0VDG4 424 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 NCAPH2Q6IBW4 605 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 TTBK2Q6IQ55 1244 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 VSTM4Q8IW00 320 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 GPR156Q8NFN8 814 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SDCCAG3Q96C92 435 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 WACQ9BTA9 647 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 RTFDC1Q9BY42 306 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 WNT8AQ9H1J5 351 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 VPS51Q9UID3 782 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ARHGEF10O15013 1369 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 PIAS2O75928 621 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ZNF202O95125 648 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 NUP62P37198 522 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 TUBP50607 506 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 YBEYP58557 167 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ITKQ08881 620 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 PLEKHA7Q6IQ23 1121 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 FOXR2Q6PJQ5 311 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 LARP1Q6PKG0 1096 aaKnown RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 CCDC149Q6ZUS6 474 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 VSIG1Q86XK7 387 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 TICAM1Q8IUC6 712 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 FMR1NBQ8N0W7 255 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ANKFN1Q8N957 763 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 GDAP1L1Q96MZ0 367 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 SECISBP2Q96T21 854 aaKnown RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 BCL7BQ9BQE9 202 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 CDADC1Q9BWV3 514 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 ACTR5Q9H9F9 607 aaPredicted RBP9.31□□□□□ -0.92
VPS13D-212ENST00000543766 USP6P35125 1406 aa9.31□□□□□ -0.92
VPS13D-212ENST00000543766 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 DNAJB6O75190 326 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 GARTP22102 1010 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 HSD17B4P51659 736 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 ARFIP2P53365 341 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 SSTP61278 116 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 MLC1Q15049 377 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 SGO2Q562F6 1265 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 DCAF17Q5H9S7 520 aaPredicted RBP9.3□□□□□ -0.92
VPS13D-212ENST00000543766 GALNTL5Q7Z4T8 443 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 PATL1Q86TB9 770 aaKnown RBP9.3□□□□□ -0.92
VPS13D-212ENST00000543766 APLFQ8IW19 511 aaPredicted RBP9.3□□□□□ -0.92
VPS13D-212ENST00000543766 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 TRMT2BQ96GJ1 504 aaKnown RBP9.3□□□□□ -0.92
VPS13D-212ENST00000543766 HES6Q96HZ4 224 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 ZC3H10Q96K80 434 aaKnown RBP9.3□□□□□ -0.92
VPS13D-212ENST00000543766 CAMK1GQ96NX5 476 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 HPF1Q9NWY4 346 aa9.3□□□□□ -0.92
VPS13D-212ENST00000543766 SERPINI2O75830 405 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms