RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 JAKMIP3Q5VZ66 844 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 SYNPOQ8N3V7 929 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 FANCBQ8NB91 859 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 HASPINQ8TF76 798 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 PRPF31Q8WWY3 499 aaKnown RBP5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 RSPRY1Q96DX4 576 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 MSANTD3Q96H12 275 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 UNC45AQ9H3U1 944 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 OSBPL3Q9H4L5 887 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 C8orf33Q9H7E9 229 aaPredicted RBP5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 TMEM9BQ9NQ34 198 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 FANCLQ9NW38 375 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 EML5Q05BV3 1969 aa5.36□□□□□ -1.55
NPIPB4-219ENST00000543660 ATG2BQ96BY7 2078 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 VWA8A3KMH1 1905 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 TDRD15B5MCY1 1934 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CNTNAP5Q8WYK1 1306 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SPAARA0A1B0GVQ0 90 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 EIF4E1BA6NMX2 242 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 HEPACAM2A8MVW5 462 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PATE3B3GLJ2 98 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SPECC1L-ADORA2AF8WAN1 911 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SH2B2O14492 632 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 ZNF197O14709 1029 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 DCLK1O15075 740 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CHADO15335 359 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 MSH4O15457 936 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 MEFVO15553 781 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CHMP2AO43633 222 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 TSPAN1O60635 241 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 C1QL1O75973 258 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 ABLIM3O94929 683 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PRB1P04280 392 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 KRT18P05783 430 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SRGAP2CP0DJJ0 459 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CALM1P0DP23 149 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CALM2P0DP24 149 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CALM3P0DP25 149 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PCSK2P16519 638 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 LIG1P18858 919 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 FGFR3P22607 806 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 IGFBP6P24592 240 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SFNP31947 248 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 LIFRP42702 1097 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 KPNA1P52294 538 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 JAK3P52333 1124 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 IRX4P78413 519 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SIM1P81133 766 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 AMPD3Q01432 767 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SPIRE1Q08AE8 756 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 FCHO2Q0JRZ9 810 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 C19orf57Q0VDD7 668 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 LAMTOR4Q0VGL1 99 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SCAPQ12770 1279 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 IFRD2Q12894 506 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 GRIK3Q13003 919 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 TUSC3Q13454 348 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 HLTFQ14527 1009 aaKnown RBP eCLIP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PON2Q15165 354 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PPP2R5AQ15172 486 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 NAB2Q15742 525 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 UAP1L1Q3KQV9 507 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 FOXD4L6Q3SYB3 417 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 NOTUMQ6P988 496 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 B3GNT9Q6UX72 402 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 FOXD4L3Q6VB84 417 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 ANO5Q75V66 913 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 PIP4P1Q86T03 277 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 RALGPS2Q86X27 583 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CHCHD4Q8N4Q1 142 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 TSEN2Q8NCE0 465 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 ZSCAN18Q8TBC5 510 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 RNF217Q8TC41 542 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CSGALNACT1Q8TDX6 532 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 HNRNPLLQ8WVV9 542 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 GJA10Q969M2 543 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 TMEM143Q96AN5 459 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CCDC51Q96ER9 411 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CPB2Q96IY4 423 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 LRRC3BQ96PB8 259 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 INSM2Q96T92 566 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 RIT2Q99578 217 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CORO1BQ9BR76 489 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 ARHGAP9Q9BRR9 750 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 MTA3Q9BTC8 594 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 APOL6Q9BWW8 343 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 CSRNP2Q9H175 543 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 GLT8D2Q9H1C3 349 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 NXF3Q9H4D5 531 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SRA1Q9HD15 236 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 POLR3BQ9NW08 1133 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 BARHL2Q9NY43 387 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 SNTG2Q9NY99 539 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 GTSE1Q9NYZ3 720 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 KLK14Q9P0G3 267 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 MTRRQ9UBK8 725 aa5.35□□□□□ -1.55
NPIPB4-219ENST00000543660 BACE2Q9Y5Z0 518 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms