RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 KLHL30Q0D2K2 578 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 MAPRE1Q15691 268 aaKnown RBP12.67□□□□□ -0.38
DDB1-223ENST00000543658 PSMD5Q16401 504 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 PRPF38BQ5VTL8 546 aaKnown RBP12.67□□□□□ -0.38
DDB1-223ENST00000543658 TMC7Q7Z402 723 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 VPS36Q86VN1 386 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 DCP1BQ8IZD4 617 aaKnown RBP12.67□□□□□ -0.38
DDB1-223ENST00000543658 KBTBD7Q8WVZ9 684 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
DDB1-223ENST00000543658 TMEM176AQ96HP8 235 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 DEF6Q9H4E7 631 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 MRPL17Q9NRX2 175 aaKnown RBP12.67□□□□□ -0.38
DDB1-223ENST00000543658 CDH9Q9ULB4 789 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 LZTS1Q9Y250 596 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 STXBP5LQ9Y2K9 1186 aa12.67□□□□□ -0.38
DDB1-223ENST00000543658 ATP8B3O60423 1300 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 CYP26A1O43174 497 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 THAP12O43422 761 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 CSPG5O95196 566 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 CPB1P15086 417 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 ACO1P21399 889 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 GOLGA8FQ08AF8 430 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 GOLGA8DPQ0D2H9 430 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 GPM6BQ13491 265 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 SGO2Q562F6 1265 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 LIMS2Q7Z4I7 341 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 OSTM1Q86WC4 334 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 FAM71AQ8IYT1 594 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 UBR7Q8N806 425 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 POF1BQ8WVV4 589 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 ARNTL2Q8WYA1 636 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 PIK3R5Q8WYR1 880 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 SYN2Q92777 582 aaPredicted RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 HEXIM2Q96MH2 286 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 ACBD6Q9BR61 282 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 MED10Q9BTT4 135 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 ALG13Q9NP73 1137 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 TLR9Q9NR96 1032 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDB1-223ENST00000543658 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 HMGXB4Q9UGU5 601 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 CEP83Q9Y592 693 aa12.66□□□□□ -0.38
DDB1-223ENST00000543658 BZW2Q9Y6E2 419 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 MTCL1Q9Y4B5 1905 aaKnown RBP12.66□□□□□ -0.38
DDB1-223ENST00000543658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.65□□□□□ -0.38
DDB1-223ENST00000543658 GABRDO14764 452 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 OAZ2O95190 189 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 SERPING1P05155 500 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 CTSAP10619 480 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 VDRP11473 427 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 RAD23BP54727 409 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 ARPP19P56211 112 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 PSMC1P62191 440 aaKnown RBP12.65□□□□□ -0.38
DDB1-223ENST00000543658 DSG1Q02413 1049 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 ORC1Q13415 861 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
DDB1-223ENST00000543658 STILQ15468 1287 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
DDB1-223ENST00000543658 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 PLPP4Q5VZY2 271 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
DDB1-223ENST00000543658 C4orf50Q6ZRC1 276 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 RNF168Q8IYW5 571 aaPredicted RBP12.65□□□□□ -0.38
DDB1-223ENST00000543658 B3GALNT2Q8NCR0 500 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 B3GALT6Q96L58 329 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 DNAJC7Q99615 494 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 TCF25Q9BQ70 676 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 EMILIN2Q9BXX0 1053 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 ZBP1Q9H171 429 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 PRO3102Q9H379 93 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 AIPL1Q9NZN9 384 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 HESX1Q9UBX0 185 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 PLXNA3P51805 1871 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 MYO16Q9Y6X6 1858 aa12.65□□□□□ -0.38
DDB1-223ENST00000543658 H3BNC9 293 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 ARHGEF15O94989 841 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 PTPN1P18031 435 aaKnown RBP12.64□□□□□ -0.39
DDB1-223ENST00000543658 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
DDB1-223ENST00000543658 LMO2P25791 158 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 SLC8A3P57103 927 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 CYP27A1Q02318 531 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 SMARCB1Q12824 385 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 LRIT3Q3SXY7 679 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 PDE12Q6L8Q7 609 aaKnown RBP12.64□□□□□ -0.39
DDB1-223ENST00000543658 CYP26C1Q6V0L0 522 aa12.64□□□□□ -0.39
DDB1-223ENST00000543658 TAS1R1Q7RTX1 841 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms